RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CFAP54Q96N23 3096 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 RSAD1Q9HA92 442 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 DDHD2O94830 711 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 REC8O95072 547 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 ALDH2P05091 517 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 CNPP09543 421 aaKnown RBP20.9■□□□□ 0.94
NME3-204ENST00000563498 KLRC2P26717 231 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 TDGQ13569 410 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 RUFY3Q7L099 469 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 KRT25Q7Z3Z0 450 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 PSPC1Q8WXF1 523 aaKnown RBP20.9■□□□□ 0.94
NME3-204ENST00000563498 FAM20AQ96MK3 541 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 DHX33Q9H6R0 707 aaKnown RBP20.9■□□□□ 0.94
NME3-204ENST00000563498 MRPL17Q9NRX2 175 aaKnown RBP20.9■□□□□ 0.94
NME3-204ENST00000563498 VAV3Q9UKW4 847 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 MYO15AQ9UKN7 3530 aa20.9■□□□□ 0.94
NME3-204ENST00000563498 PRR23AA6NEV1 266 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 SPDYE4A6NLX3 237 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 EML1O00423 815 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 CPLX1O14810 134 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 RFC5P40937 340 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 TOB2Q14106 344 aaPredicted RBP20.89■□□□□ 0.93
NME3-204ENST00000563498 ASCL5Q7RTU5 278 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 CNNM3Q8NE01 707 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 CMASQ8NFW8 434 aaPredicted RBP20.89■□□□□ 0.93
NME3-204ENST00000563498 PRPF31Q8WWY3 499 aaKnown RBP20.89■□□□□ 0.93
NME3-204ENST00000563498 ZNF274Q96GC6 653 aaPredicted RBP20.89■□□□□ 0.93
NME3-204ENST00000563498 CEP170P1Q96L14 293 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 FAM193BQ96PV7 902 aaPredicted RBP20.89■□□□□ 0.93
NME3-204ENST00000563498 KCNMB3Q9NPA1 279 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 UBN1Q9NPG3 1134 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 FAN1Q9Y2M0 1017 aa20.89■□□□□ 0.93
NME3-204ENST00000563498 SLC37A4O43826 429 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 GAS2O43903 313 aaKnown RBP20.88■□□□□ 0.93
NME3-204ENST00000563498 P4HBP07237 508 aaKnown RBP20.88■□□□□ 0.93
NME3-204ENST00000563498 HOXA11P31270 313 aaPredicted RBP20.88■□□□□ 0.93
NME3-204ENST00000563498 NPEPPSP55786 919 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 PCBP1Q15365 356 aaKnown RBP eCLIP20.88■□□□□ 0.93
NME3-204ENST00000563498 INF2Q27J81 1249 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 LETM2Q2VYF4 491 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 UBXN11Q5T124 520 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 CWF19L1Q69YN2 538 aaKnown RBP20.88■□□□□ 0.93
NME3-204ENST00000563498 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 FEZF2Q8TBJ5 459 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 RHOBTB2Q9BYZ6 727 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 MINDY3Q9H8M7 445 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 DUSP12Q9UNI6 340 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 SSX2IPQ9Y2D8 614 aa20.88■□□□□ 0.93
NME3-204ENST00000563498 NRP1O14786 923 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 ASAP2O43150 1006 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 EPB41L2O43491 1005 aaKnown RBP20.87■□□□□ 0.93
NME3-204ENST00000563498 SOD2P04179 222 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 SRGAP2CP0DJJ0 459 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 NCLP19338 710 aaKnown RBP20.87■□□□□ 0.93
NME3-204ENST00000563498 AOC1P19801 751 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 AFF1P51825 1210 aaKnown RBP20.87■□□□□ 0.93
NME3-204ENST00000563498 LAMTOR4Q0VGL1 99 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 CPLX2Q6PUV4 134 aaKnown RBP20.87■□□□□ 0.93
NME3-204ENST00000563498 CYP26C1Q6V0L0 522 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 C4orf19Q8IY42 314 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 TCP11Q8WWU5 503 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 KCNK12Q9HB15 430 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 IGSF9Q9P2J2 1179 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 DPP7Q9UHL4 492 aa20.87■□□□□ 0.93
NME3-204ENST00000563498 TBX3O15119 743 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 INPPL1O15357 1258 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 SSBP05455 408 aaKnown RBP eCLIP20.86■□□□□ 0.93
NME3-204ENST00000563498 URODP06132 367 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 GCFC2P16383 781 aaKnown RBP20.86■□□□□ 0.93
NME3-204ENST00000563498 FOXK2Q01167 660 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 ELMSAN1Q6PJG2 1045 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 ZNF579Q8NAF0 562 aaKnown RBP20.86■□□□□ 0.93
NME3-204ENST00000563498 FLCNQ8NFG4 579 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 TMEM143Q96AN5 459 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 RPS6KC1Q96S38 1066 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 HERC2P3Q9BVR0 1158 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 SLKQ9H2G2 1235 aaPredicted RBP20.86■□□□□ 0.93
NME3-204ENST00000563498 WRAP73Q9P2S5 460 aaPredicted RBP20.86■□□□□ 0.93
NME3-204ENST00000563498 CYP46A1Q9Y6A2 500 aa20.86■□□□□ 0.93
NME3-204ENST00000563498 EFEMP2O95967 443 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 POMCP01189 267 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 ADH1AP07327 375 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 NPR3P17342 541 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 YWHABP31946 246 aaKnown RBP20.85■□□□□ 0.93
NME3-204ENST00000563498 OTUD6AQ7L8S5 288 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 NEK8Q86SG6 692 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 RNF168Q8IYW5 571 aaPredicted RBP20.85■□□□□ 0.93
NME3-204ENST00000563498 SMG8Q8ND04 991 aaKnown RBP20.85■□□□□ 0.93
NME3-204ENST00000563498 CCDC51Q96ER9 411 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 AIFM3Q96NN9 605 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 RTP3Q9BQQ7 232 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 MAN1C1Q9NR34 630 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 MARCH5Q9NX47 278 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 C2orf16Q68DN1 1984 aa20.85■□□□□ 0.93
NME3-204ENST00000563498 CCDC194A0A1B0GVG4 234 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 C1RP00736 705 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 ITGA4P13612 1032 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 AXLP30530 894 aa20.84■□□□□ 0.93
NME3-204ENST00000563498 EMC2Q15006 297 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms