RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CGNQ9P2M7 1197 aaKnown RBP11.14□□□□□ -0.63
SMG1-208ENST00000563448 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CABYRO75952 493 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 AKAP3O75969 853 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 PIGRP01833 764 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 GNAT1P11488 350 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ADSSP30520 456 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 MTIF2P46199 727 aaKnown RBP11.13□□□□□ -0.63
SMG1-208ENST00000563448 EFNA5P52803 228 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 MARSP56192 900 aaKnown RBP11.13□□□□□ -0.63
SMG1-208ENST00000563448 NLRP11P59045 1033 aaKnown RBP11.13□□□□□ -0.63
SMG1-208ENST00000563448 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 TMEM62Q0P6H9 643 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CCDC173Q0VFZ6 552 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ZSWIM2Q8NEG5 633 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 DNAJB3Q8WWF6 145 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CTAGE1Q96RT6 745 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CBWD1Q9BRT8 395 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 VPS16Q9H269 839 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
SMG1-208ENST00000563448 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 HNRNPDLO14979 420 aaKnown RBP11.13□□□□□ -0.63
SMG1-208ENST00000563448 TEX33O43247 280 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 GPR32O75388 356 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 GNA14O95837 355 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 PRKCBP05771 671 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 IQCF3P0C7M6 154 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CDC25BP30305 580 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CYP2J2P51589 502 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ITGA7Q13683 1181 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 MYBPC2Q14324 1141 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 PTPN21Q16825 1174 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 MIIPQ5JXC2 388 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ARMCX5Q6P1M9 558 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ZNF410Q86VK4 478 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 ARRDC4Q8NCT1 418 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 BICD1Q96G01 975 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 TARS2Q9BW92 718 aaKnown RBP11.13□□□□□ -0.63
SMG1-208ENST00000563448 ADAMTS10Q9H324 1103 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 FZD8Q9H461 694 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 HSPBP1Q9NZL4 362 aa11.13□□□□□ -0.63
SMG1-208ENST00000563448 PDCD11Q14690 1871 aaKnown RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 CEP350Q5VT06 3117 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 SLC16A3O15427 465 aaKnown RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 PHKA2P46019 1235 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 LIG4P49917 911 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 FBXO46Q6PJ61 603 aaPredicted RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 FRMD5Q7Z6J6 570 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 NLRP7Q8WX94 980 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
SMG1-208ENST00000563448 DEFB118Q96PH6 123 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 HAPLN2Q9GZV7 340 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 STYXL1Q9Y6J8 313 aa11.12□□□□□ -0.63
SMG1-208ENST00000563448 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 INO80B-WBP1J3KQ70 363 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 ACKR2O00590 384 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 N4BP3O15049 544 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 CSDE1O75534 798 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 GARTP22102 1010 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 MAPK6Q16659 721 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 MAN2A1Q16706 1144 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 FAM187BQ17R55 369 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 FILIP1LQ4L180 1135 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 TRIM59Q8IWR1 403 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 POMGNT1Q8WZA1 660 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 WNT8BQ93098 351 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 VTI1AQ96AJ9 217 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 BORCS6Q96GS4 357 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 MKNK1Q9BUB5 465 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 NOC4LQ9BVI4 516 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 MRPL4Q9BYD3 311 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 INO80BQ9C086 356 aaPredicted RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 GOLGA8IPA6NC78 632 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 GOLGA8JA6NMD2 632 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 B4GALT5O43286 388 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 EXOC3O60645 756 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 EPB41P11171 864 aaKnown RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 PBX1P40424 430 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
SMG1-208ENST00000563448 AMHR2Q16671 573 aa11.11□□□□□ -0.63
SMG1-208ENST00000563448 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms