RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CXorf67Q86X51 503 aaPredicted RBP6.67□□□□□ -1.34
LINC00254-201ENST00000563416 NKD2Q969F2 451 aaPredicted RBP6.67□□□□□ -1.34
LINC00254-201ENST00000563416 GNRHR2Q96P88 292 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 DPYSL5Q9BPU6 564 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 OSBPL6Q9BZF3 934 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 SEMA4AQ9H3S1 761 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 DNAI1Q9UI46 699 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 SCAPERQ9BY12 1400 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 PLEKHH2Q8IVE3 1493 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 ARHGEF5Q12774 1597 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 PATE3B3GLJ2 98 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 SLC26A4O43511 780 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 NRP2O60462 931 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 DNAJC6O75061 913 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 ID4P47928 161 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 GPR15P49685 360 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 HGFACQ04756 655 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 CCDC178Q5BJE1 867 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 ZBTB41Q5SVQ8 909 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 EFCAB2Q5VUJ9 269 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 IQSEC1Q6DN90 963 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 RSAD2Q8WXG1 361 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 SLC6A15Q9H2J7 730 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 NELFAQ9H3P2 528 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 DEF6Q9H4E7 631 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 ZFR2Q9UPR6 939 aaKnown RBP6.66□□□□□ -1.34
LINC00254-201ENST00000563416 TCAF1Q9Y4C2 921 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 MLH3Q9UHC1 1453 aa6.66□□□□□ -1.34
LINC00254-201ENST00000563416 PFKMP08237 780 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 ADRB1P08588 477 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 MANFP55145 182 aaKnown RBP6.65□□□□□ -1.34
LINC00254-201ENST00000563416 ICAM4Q14773 271 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 TCTN3Q6NUS6 607 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 PLA2G15Q8NCC3 412 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 DNERQ8NFT8 737 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 CFHR4Q92496 578 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 RABGGTAQ92696 567 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 C8orf49Q96NF6 230 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 ACAP3Q96P50 834 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.34
LINC00254-201ENST00000563416 MS4A5Q9H3V2 200 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 C14orf93Q9H972 538 aaKnown RBP6.65□□□□□ -1.34
LINC00254-201ENST00000563416 MCM8Q9UJA3 840 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 USP18Q9UMW8 372 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 PPP2R3BQ9Y5P8 575 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 RBM8AQ9Y5S9 174 aaKnown RBP6.65□□□□□ -1.34
LINC00254-201ENST00000563416 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.34
LINC00254-201ENST00000563416 KIAA1107Q9UPP5 1409 aa6.65□□□□□ -1.35
LINC00254-201ENST00000563416 CAMSAP2Q08AD1 1489 aa6.65□□□□□ -1.35
LINC00254-201ENST00000563416 ATP7AQ04656 1500 aa6.65□□□□□ -1.35
LINC00254-201ENST00000563416 PLXNC1O60486 1568 aa6.65□□□□□ -1.35
LINC00254-201ENST00000563416 MAST1Q9Y2H9 1570 aa6.65□□□□□ -1.35
LINC00254-201ENST00000563416 MADDQ8WXG6 1647 aa6.65□□□□□ -1.35
LINC00254-201ENST00000563416 RIMS1Q86UR5 1692 aaKnown RBP6.65□□□□□ -1.35
LINC00254-201ENST00000563416 PRSS38A1L453 326 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 LCHNA4D1U4 455 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 GOLGA8BA8MQT2 603 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 MATN2O00339 956 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 ZNF623O75123 536 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 RAD17O75943 681 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 BUD31P41223 144 aaPredicted RBP6.64□□□□□ -1.35
LINC00254-201ENST00000563416 NRG3P56975 720 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 BPIFB4P59827 614 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 TMPRSS15P98073 1019 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 TCIRG1Q13488 830 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 STAT4Q14765 748 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 GAGE13Q4V321 117 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 KRT40Q6A162 431 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 POLNQ7Z5Q5 900 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 SHCBP1Q8NEM2 672 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 ATL2Q8NHH9 583 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 WDR66Q8TBY9 1149 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 GAB3Q8WWW8 586 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 DVL3Q92997 716 aaPredicted RBP6.64□□□□□ -1.35
LINC00254-201ENST00000563416 BORCS6Q96GS4 357 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 OR14A2Q96R54 314 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 UIMC1Q96RL1 719 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 PLA2G12BQ9BX93 195 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 ANO3Q9BYT9 981 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 ST6GALNAC2Q9UJ37 374 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC00254-201ENST00000563416 SLC30A1Q9Y6M5 507 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 CCNB3Q8WWL7 1395 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 YEATS2Q9ULM3 1422 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 TRAPPC8Q9Y2L5 1435 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 PTPN23Q9H3S7 1636 aa6.64□□□□□ -1.35
LINC00254-201ENST00000563416 C2orf78A6NCI8 922 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 FOXS1O43638 330 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 DNMT1P26358 1616 aaKnown RBP6.63□□□□□ -1.35
LINC00254-201ENST00000563416 SELENOPP49908 381 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 ADCY7P51828 1080 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 ADAM17P78536 824 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 ATP2C1P98194 919 aaPredicted RBP6.63□□□□□ -1.35
LINC00254-201ENST00000563416 RNF219Q5W0B1 726 aaPredicted RBP6.63□□□□□ -1.35
LINC00254-201ENST00000563416 CLEC14AQ86T13 490 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 SPATS2Q86XZ4 545 aaKnown RBP6.63□□□□□ -1.35
LINC00254-201ENST00000563416 FUKQ8N0W3 1084 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 ANKRD53Q8N9V6 530 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 MBD5Q9P267 1494 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms