RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 EPHA7Q15375 998 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 KIAA1841Q6NSI8 718 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 PIK3AP1Q6ZUJ8 805 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 SLC7A3Q8WY07 619 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 PGBD4Q96DM1 585 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 LXNQ9BS40 222 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 FAM86C1Q9NVL1 165 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 DZANK1Q9NVP4 752 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 SORCS3Q9UPU3 1222 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 MYO10Q9HD67 2058 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 CCNT1O60563 726 aaKnown RBP18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 LILRB3O75022 631 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 CTDNEP1O95476 244 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 ASGR2P07307 311 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 MTMR3Q13615 1198 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 GIT2Q14161 759 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 SRGAP1Q7Z6B7 1085 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 C4orf19Q8IY42 314 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 PSPC1Q8WXF1 523 aaKnown RBP18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 DYDC2Q96IM9 177 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 RSAD1Q9HA92 442 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 TPCN1Q9ULQ1 816 aa18.78■□□□□ 0.6
HDGFL3-203ENST00000563404 STK36Q9NRP7 1315 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 TBX3O15119 743 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 DKC1O60832 514 aaKnown RBP eCLIP18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 SSBP05455 408 aaKnown RBP eCLIP18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 GCFC2P16383 781 aaKnown RBP18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 YWHABP31946 246 aaKnown RBP18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 RFC5P40937 340 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 EMC2Q15006 297 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 ATAT1Q5SQI0 421 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 NCAPH2Q6IBW4 605 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 TMC5Q6UXY8 1006 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 UBALD2Q8IYN6 164 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 ZDHHC14Q8IZN3 488 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 SMG8Q8ND04 991 aaKnown RBP18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 URGCPQ8TCY9 931 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 KLHL5Q96PQ7 755 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 XPNPEP1Q9NQW7 623 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 LIMD1Q9UGP4 676 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 PPME1Q9Y570 386 aa18.77■□□□□ 0.6
HDGFL3-203ENST00000563404 CACNA1HO95180 2353 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 CARNS1A5YM72 827 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 NRP1O14786 923 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 PFKFB2O60825 505 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 POMCP01189 267 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 CNPP09543 421 aaKnown RBP18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 NCLP19338 710 aaKnown RBP18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 CYP4A11Q02928 519 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 CABP7Q86V35 215 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 TDRD5Q8NAT2 981 aaKnown RBP18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 TMEM87AQ8NBN3 555 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 RNF149Q8NC42 400 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 EIF2AQ9BY44 585 aaKnown RBP18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 MARCH5Q9NX47 278 aa18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 DBR1Q9UK59 544 aaKnown RBP18.76■□□□□ 0.59
HDGFL3-203ENST00000563404 DENND4AQ7Z401 1863 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 CDKL5O76039 1030 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 CLCN4P51793 760 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 NR5A1Q13285 461 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 XKR9Q5GH70 373 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 TAS1R1Q7RTX1 841 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 GPR149Q86SP6 731 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 EXOC8Q8IYI6 725 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 TNFRSF25Q93038 417 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 TMEM175Q9BSA9 504 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 PPP4R2Q9NY27 417 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 USTQ9Y2C2 406 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 FAN1Q9Y2M0 1017 aa18.75■□□□□ 0.59
HDGFL3-203ENST00000563404 CNTNAP2Q9UHC6 1331 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 ASAP2O43150 1006 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 TSPAN1O60635 241 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 SLITRK3O94933 977 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 ALDH2P05091 517 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 FDPSP14324 419 aaKnown RBP18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 KLRC2P26717 231 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 PPFIBP1Q86W92 1011 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 COLGALT2Q8IYK4 626 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 TMEM105Q8N8V8 129 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 MTRQ99707 1265 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 ZSWIM4Q9H7M6 989 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 SFXN1Q9H9B4 322 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 MIOSQ9NXC5 875 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 HES2Q9Y543 173 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 IPPQ9Y573 584 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 ARID2Q68CP9 1835 aa18.74■□□□□ 0.59
HDGFL3-203ENST00000563404 F8W810 466 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 H0Y858 1186 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 WNT7AO00755 349 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 INPPL1O15357 1258 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 GAS2O43903 313 aaKnown RBP18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 EFEMP2O95967 443 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 XBP1P17861 261 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 PTENP60484 403 aa18.73■□□□□ 0.59
HDGFL3-203ENST00000563404 OTUD6AQ7L8S5 288 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms