RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 EHHADHQ08426 723 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 IKBKEQ14164 716 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 ZNF720Q7Z2F6 126 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 GSDMAQ96QA5 445 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 FIZ1Q96SL8 496 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 MRPL4Q9BYD3 311 aaKnown RBP20.69■□□□□ 0.9
RAB40C-207ENST00000563109 MTIF3Q9H2K0 278 aaKnown RBP20.69■□□□□ 0.9
RAB40C-207ENST00000563109 MICAL3Q7RTP6 2002 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 CNTNAP2Q9UHC6 1331 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 TET1Q8NFU7 2136 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 ACKR2O00590 384 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 BAIAP3O94812 1187 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 RHOBTB3O94955 611 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 FGBP02675 491 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 NOTUMQ6P988 496 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 KCNN1Q92952 543 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 HPS3Q969F9 1004 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 SYAP1Q96A49 352 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-207ENST00000563109 CCDC51Q96ER9 411 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 BICD1Q96G01 975 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 GTPBP4Q9BZE4 634 aaKnown RBP20.68■□□□□ 0.9
RAB40C-207ENST00000563109 CHST12Q9NRB3 414 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 TBX20Q9UMR3 447 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 EXOC7Q9UPT5 735 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 PCDHA5Q9Y5H7 936 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 UBE4BO95155 1302 aa20.68■□□□□ 0.9
RAB40C-207ENST00000563109 ABHD14A-ACY1A0A1B0GW23 586 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 EIF3DO15371 548 aaKnown RBP eCLIP20.67■□□□□ 0.9
RAB40C-207ENST00000563109 MYBP10242 640 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 GTF2BQ00403 316 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 AMHR2Q16671 573 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 ZC2HC1CQ53FD0 456 aaPredicted RBP20.67■□□□□ 0.9
RAB40C-207ENST00000563109 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
RAB40C-207ENST00000563109 ZNF365Q70YC5 407 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 APBB1IPQ7Z5R6 666 aaPredicted RBP20.67■□□□□ 0.9
RAB40C-207ENST00000563109 ERCC4Q92889 916 aaPredicted RBP20.67■□□□□ 0.9
RAB40C-207ENST00000563109 ACCSQ96QU6 501 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 UBE2OQ9C0C9 1292 aaKnown RBP20.67■□□□□ 0.9
RAB40C-207ENST00000563109 TMX1Q9H3N1 280 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 SLC39A2Q9NP94 309 aa20.67■□□□□ 0.9
RAB40C-207ENST00000563109 ZBBXA8MT70 800 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 N4BP3O15049 544 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 B4GALT5O43286 388 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 PPP1R37O75864 691 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 KIF20AO95235 890 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 ARF4P18085 180 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-207ENST00000563109 KCNJ6P48051 423 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 CASP5P51878 434 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 EPHB4P54760 987 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 TMEM240Q5SV17 173 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 TWF2Q6IBS0 349 aaKnown RBP20.66■□□□□ 0.9
RAB40C-207ENST00000563109 OTOP2Q7RTS6 562 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 TAS1R3Q7RTX0 852 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 MAP4K3Q8IVH8 894 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 SPATA20Q8TB22 786 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 VWCEQ96DN2 955 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 CPB2Q96IY4 423 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 ADAM2Q99965 735 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.66■□□□□ 0.9
RAB40C-207ENST00000563109 C1orf112Q9NSG2 853 aa20.66■□□□□ 0.9
RAB40C-207ENST00000563109 HNRNPDLO14979 420 aaKnown RBP20.65■□□□□ 0.9
RAB40C-207ENST00000563109 LIG4P49917 911 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 SKOR2Q2VWA4 1001 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-207ENST00000563109 CCDC183Q5T5S1 534 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 ATF7IP2Q5U623 682 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 ZPBP2Q6X784 338 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 SYCP3Q8IZU3 236 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 GDF15Q99988 308 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 ADPGKQ9BRR6 497 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 FGFBP2Q9BYJ0 223 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 TSPYL2Q9H2G4 693 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-207ENST00000563109 TMEM206Q9H813 350 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-207ENST00000563109 KIAA1468Q9P260 1216 aa20.65■□□□□ 0.9
RAB40C-207ENST00000563109 MGEA5O60502 916 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 PRPF6O94906 941 aaKnown RBP20.64■□□□□ 0.89
RAB40C-207ENST00000563109 STK4Q13043 487 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 DSC3Q14574 896 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 TCTN1Q2MV58 587 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 KLHL40Q2TBA0 621 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 NT5DC1Q5TFE4 455 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 SLC27A1Q6PCB7 646 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 C16orf59Q7L2K0 433 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 KIAA0895Q8NCT3 520 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 HERVK_113Q902F9 699 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 ACO2Q99798 780 aaKnown RBP20.64■□□□□ 0.89
RAB40C-207ENST00000563109 TARS2Q9BW92 718 aaKnown RBP20.64■□□□□ 0.89
RAB40C-207ENST00000563109 STRA6Q9BX79 667 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 TRIM6Q9C030 488 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-207ENST00000563109 RGS18Q9NS28 235 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 MAN1B1Q9UKM7 699 aa20.64■□□□□ 0.89
RAB40C-207ENST00000563109 AMHP03971 560 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 EDN1P05305 212 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 SKIP12755 728 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 HOXA11P31270 313 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-207ENST00000563109 MATR3P43243 847 aaKnown RBP eCLIP20.63■□□□□ 0.89
RAB40C-207ENST00000563109 SARSP49591 514 aaKnown RBP20.63■□□□□ 0.89
RAB40C-207ENST00000563109 RAB27AP51159 221 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 NFKBIBQ15653 356 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 ZNF658Q5TYW1 1059 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 731.9 ms