RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 MOGSQ13724 837 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SMU1Q2TAY7 513 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SNAP47Q5SQN1 464 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 CFAP161Q6P656 301 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 LZTR1Q8N653 840 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 FLAD1Q8NFF5 587 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 SECISBP2Q96T21 854 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 EIF2AK1Q9BQI3 630 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 IFT22Q9H7X7 185 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 GID8Q9NWU2 228 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 MRPL39Q9NYK5 338 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 ANGPTL3Q9Y5C1 460 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 EID1Q9Y6B2 187 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 EIF2AK4Q9P2K8 1649 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 ARHGEF5Q12774 1597 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SLC12A8A0AV02 714 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 RSPH10B2B2RC85 870 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 LINC01387J3KSC0 135 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 ADAMTS4O75173 837 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 POP4O95707 220 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 MYL3P08590 195 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 RSPH10BP0C881 870 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 GNL1P36915 607 aaPredicted RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 PRKCIP41743 596 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 GSSP48637 474 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 ZNF165P49910 485 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 NAA20P61599 178 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 RAC1P63000 192 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SPCS2Q15005 226 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 FBXO43Q4G163 708 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 NLRP10Q86W26 655 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SPATA24Q86W54 205 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 LRRC71Q8N4P6 559 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 CYFIP2Q96F07 1278 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 DHRS9Q9BPW9 319 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 CD2APQ9Y5K6 639 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 A6NL46 340 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 CHURC1-FNTBB4DL54 471 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 E7EVH7 732 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 CUTAO60888 179 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 BAG3O95817 575 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 FAM107AO95990 144 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 ATF6P18850 670 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 KCNA3P22001 575 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SLC26A3P40879 764 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 ACADVLP49748 655 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 POLA2Q14181 598 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 SSPNQ14714 243 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 DALRD3Q5D0E6 543 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 ERAP2Q6P179 960 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 PATL1Q86TB9 770 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 NCLNQ969V3 563 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 USB1Q9BQ65 265 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 DESI2Q9BSY9 194 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 APOL5Q9BWW9 433 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 RNF38Q9H0F5 515 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
CDH1-205ENST00000562836 ADAMTS8Q9UP79 889 aa10.03□□□□□ -0.8
CDH1-205ENST00000562836 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.8
CDH1-205ENST00000562836 SCAF11Q99590 1463 aaKnown RBP10.02□□□□□ -0.8
CDH1-205ENST00000562836 NUP160Q12769 1436 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 CCDC163A0A0D9SF12 145 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 SYNDIG1LA6NDD5 238 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 F8W810 466 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 CAPN1P07384 714 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 WSCD2Q2TBF2 565 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 DAB2IPQ5VWQ8 1189 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 STK32CQ86UX6 486 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 COG1Q8WTW3 980 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 CCT6BQ92526 530 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 RNF41Q9H4P4 317 aaPredicted RBP10.02□□□□□ -0.81
CDH1-205ENST00000562836 SAMSN1Q9NSI8 373 aaKnown RBP10.02□□□□□ -0.81
CDH1-205ENST00000562836 HECAQ9UBI9 543 aaPredicted RBP10.02□□□□□ -0.81
CDH1-205ENST00000562836 VTI1BQ9UEU0 232 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 SNX14Q9Y5W7 946 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 ABCC10Q5T3U5 1492 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 WDR7Q9Y4E6 1490 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 PNMA6EA0A0J9YXQ4 647 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 TOR1BO14657 336 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 TMEM127O75204 238 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 ALOX5P09917 674 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 POLR2CP19387 275 aaPredicted RBP10.02□□□□□ -0.81
CDH1-205ENST00000562836 RASA1P20936 1047 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 DCTN2Q13561 401 aaKnown RBP10.02□□□□□ -0.81
CDH1-205ENST00000562836 KRT32Q14532 448 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 SGCAQ16586 387 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 ZNF792Q3KQV3 632 aa10.02□□□□□ -0.81
CDH1-205ENST00000562836 RILPL1Q5EBL4 403 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms