RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 ZNF627Q7L945 461 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 LYSMD2Q8IV50 215 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 AHI1Q8N157 1196 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 AMER2Q8N7J2 671 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 MDGA1Q8NFP4 955 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 CLIP3Q96DZ5 547 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 SLITRK6Q9H5Y7 841 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 GPRC5BQ9NZH0 403 aa6.28□□□□□ -1.4
CHD9-206ENST00000562791 XDHP47989 1333 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 GRXCR1A8MXD5 290 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 KDM1AO60341 852 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 PDE8AO60658 829 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 FAM20BO75063 409 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 RPS6KA4O75676 772 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 LSP1P33241 339 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 CASRP41180 1078 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 OCRLQ01968 901 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
CHD9-206ENST00000562791 LDLRAD3Q86YD5 345 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 SLC41A1Q8IVJ1 513 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 GSPT2Q8IYD1 628 aaKnown RBP6.27□□□□□ -1.41
CHD9-206ENST00000562791 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
CHD9-206ENST00000562791 GAB3Q8WWW8 586 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 MNTQ99583 582 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 ANO3Q9BYT9 981 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 EVLQ9UI08 416 aaPredicted RBP6.27□□□□□ -1.41
CHD9-206ENST00000562791 REXO2Q9Y3B8 237 aaKnown RBP6.27□□□□□ -1.41
CHD9-206ENST00000562791 TBX22Q9Y458 520 aa6.27□□□□□ -1.41
CHD9-206ENST00000562791 IPO13O94829 963 aaKnown RBP6.26□□□□□ -1.41
CHD9-206ENST00000562791 ADH4P08319 380 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 MAKP20794 623 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 PPARAQ07869 468 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 BROXQ5VW32 411 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 ST8SIA2Q92186 375 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 SLC5A5Q92911 643 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 CHFRQ96EP1 664 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 IKZF4Q9H2S9 585 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 TRPS1Q9UHF7 1281 aa6.26□□□□□ -1.41
CHD9-206ENST00000562791 A0A1W2PR48 441 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 MYCLP1P12525 358 aaPredicted RBP6.25□□□□□ -1.41
CHD9-206ENST00000562791 HK1P19367 917 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 ID4P47928 161 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 TGFB2P61812 414 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 MGAT5Q09328 741 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 DDB1Q16531 1140 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 Q6ZPA2 131 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 APBB1IPQ7Z5R6 666 aaPredicted RBP6.25□□□□□ -1.41
CHD9-206ENST00000562791 CPEB1Q9BZB8 566 aaKnown RBP6.25□□□□□ -1.41
CHD9-206ENST00000562791 PRSS50Q9UI38 385 aa6.25□□□□□ -1.41
CHD9-206ENST00000562791 NRP1O14786 923 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 HOXA3O43365 443 aaPredicted RBP6.24□□□□□ -1.41
CHD9-206ENST00000562791 MFAP3LO75121 409 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 BPIP17213 487 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 KRT4P19013 534 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 GNAT2P19087 354 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 NR4A1P22736 598 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 RABL3Q5HYI8 236 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 CCDC62Q6P9F0 684 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 ZNF662Q6ZS27 426 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 FRMD7Q6ZUT3 714 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 TAS1R1Q7RTX1 841 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 RNF180Q86T96 592 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 C11orf74Q86VG3 221 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 LSM14BQ9BX40 385 aaKnown RBP6.24□□□□□ -1.41
CHD9-206ENST00000562791 NUMBLQ9Y6R0 609 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 CLSPNQ9HAW4 1339 aa6.24□□□□□ -1.41
CHD9-206ENST00000562791 GOLGA6L6A8MZA4 724 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 TMEM127O75204 238 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 PEX11BO96011 259 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 LPLP06858 475 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 GPR15P49685 360 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 DPTQ07507 201 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 PDCD1Q15116 288 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 PLEKHG4Q58EX7 1191 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 DCAF17Q5H9S7 520 aaPredicted RBP6.23□□□□□ -1.41
CHD9-206ENST00000562791 PITRM1Q5JRX3 1037 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 NAIF1Q69YI7 327 aaPredicted RBP6.23□□□□□ -1.41
CHD9-206ENST00000562791 PCSK4Q6UW60 755 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 THNSL2Q86YJ6 484 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 OR5M3Q8NGP4 307 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 NRDE2Q9H7Z3 1164 aa6.23□□□□□ -1.41
CHD9-206ENST00000562791 OVOL3O00110 214 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 NEMP1O14524 444 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 NRP2O60462 931 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 MRPL49Q13405 166 aaKnown RBP6.22□□□□□ -1.41
CHD9-206ENST00000562791 ATP13A4Q4VNC1 1196 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 CCDC178Q5BJE1 867 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 CT83Q5H943 113 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 LMBR1LQ6UX01 489 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 GLB1L2Q8IW92 636 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 LILRA3Q8N6C8 439 aaPredicted RBP6.22□□□□□ -1.41
CHD9-206ENST00000562791 IL17RAQ96F46 866 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
CHD9-206ENST00000562791 CHMP4AQ9BY43 222 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 KCTD10Q9H3F6 313 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 MAPRE3Q9UPY8 281 aa6.22□□□□□ -1.41
CHD9-206ENST00000562791 WDR33Q9C0J8 1336 aaKnown RBP6.22□□□□□ -1.41
CHD9-206ENST00000562791 XPAP23025 273 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms