RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 THEGQ9P2T0 379 aa17.83■□□□□ 0.44
COMMD4-206ENST00000562610 UNC80Q8N2C7 3258 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 MYO7AQ13402 2215 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 CNTNAP2Q9UHC6 1331 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 MEIS3P2A8K0S8 358 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 ITGB1P05556 798 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 PRKCBP05771 671 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 PLA2G4BP0C869 781 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-206ENST00000562610 PLCG1P19174 1290 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 KARSQ15046 597 aaKnown RBP17.82■□□□□ 0.44
COMMD4-206ENST00000562610 STK38Q15208 465 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 MAPK6Q16659 721 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 SPECC1Q5M775 1068 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 CDR2LQ86X02 465 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-206ENST00000562610 THNSL1Q8IYQ7 743 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 KCTD17Q8N5Z5 321 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 PRIMPOLQ96LW4 560 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 EIF2AQ9BY44 585 aaKnown RBP17.82■□□□□ 0.44
COMMD4-206ENST00000562610 CWH43Q9H720 699 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 FBXO2Q9UK22 296 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-206ENST00000562610 TCHHQ07283 1943 aa17.82■□□□□ 0.44
COMMD4-206ENST00000562610 CITO14578 2027 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 CCDC169A6NNP5 214 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 ZNF623O75123 536 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 F13A1P00488 732 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PDIA4P13667 645 aaKnown RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 TXLNAP40222 546 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PBX3P40426 434 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 SLC12A3P55017 1021 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PEX3P56589 373 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 DMP1Q13316 513 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PRPF4BQ13523 1007 aaKnown RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 DHX8Q14562 1220 aaKnown RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 NAALADL2Q58DX5 795 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 LRRC55Q6ZSA7 311 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 C1orf186Q6ZWK4 172 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 SYT2Q8N9I0 419 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 CLIC6Q96NY7 704 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 LMAN2LQ9H0V9 348 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 RSAD1Q9HA92 442 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PLAGL2Q9UPG8 496 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 IPPQ9Y573 584 aa17.81■□□□□ 0.44
COMMD4-206ENST00000562610 SRPRBQ9Y5M8 271 aaKnown RBP17.81■□□□□ 0.44
COMMD4-206ENST00000562610 PHLPP2Q6ZVD8 1323 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 NPTXRO95502 500 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 ITGA4P13612 1032 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 GUCY2CP25092 1073 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 CSPP1Q1MSJ5 1256 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 SLC27A1Q6PCB7 646 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 HACE1Q8IYU2 909 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 DAW1Q8N136 415 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 SMG8Q8ND04 991 aaKnown RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 SYMPKQ92797 1274 aaKnown RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 ZNF558Q96NG5 402 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 TIPINQ9BVW5 301 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 CCDC113Q9H0I3 377 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 GBP3Q9H0R5 595 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 NSUN3Q9H649 340 aaKnown RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 HES2Q9Y543 173 aa17.8■□□□□ 0.44
COMMD4-206ENST00000562610 TCF20Q9UGU0 1960 aaKnown RBP17.8■□□□□ 0.44
COMMD4-206ENST00000562610 ZC3H11AO75152 810 aaKnown RBP eCLIP17.79■□□□□ 0.44
COMMD4-206ENST00000562610 FGF18O76093 207 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 NPTX2P47972 431 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-206ENST00000562610 EFNA5P52803 228 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 MAPK7Q13164 816 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 PKP1Q13835 747 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 SLC39A14Q15043 492 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 FAM187BQ17R55 369 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 NOMO2Q5JPE7 1267 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 KCNT2Q6UVM3 1135 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 AGMOQ6ZNB7 445 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 USP49Q70CQ1 688 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 MRPL10Q7Z7H8 261 aaKnown RBP17.79■□□□□ 0.44
COMMD4-206ENST00000562610 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 KRI1Q8N9T8 703 aaKnown RBP17.79■□□□□ 0.44
COMMD4-206ENST00000562610 LRRC15Q8TF66 581 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 EPSTI1Q96J88 318 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 CCSER1Q9C0I3 900 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 FZD8Q9H461 694 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 NXF3Q9H4D5 531 aaKnown RBP17.79■□□□□ 0.44
COMMD4-206ENST00000562610 KMT5AQ9NQR1 393 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 TBC1D13Q9NVG8 400 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 KCND2Q9NZV8 630 aa17.79■□□□□ 0.44
COMMD4-206ENST00000562610 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
COMMD4-206ENST00000562610 CCDC39Q9UFE4 941 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms