RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 RINT1Q6NUQ1 792 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 DPY19L2P1Q6NXN4 242 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 C1orf186Q6ZWK4 172 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 INTS8Q75QN2 995 aaKnown RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 OTOP1Q7RTM1 612 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 USP37Q86T82 979 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 TAX1BP1Q86VP1 789 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 C12orf56Q8IXR9 622 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 MYCT1Q8N699 235 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 UBL4BQ8N7F7 174 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 GLIS3Q8NEA6 775 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 BCAS4Q8TDM0 211 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 HDAC7Q8WUI4 952 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 RFFLQ8WZ73 363 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 SEC14L1Q92503 715 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 P3H4Q92791 437 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 SLC5A5Q92911 643 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 LENG9Q96B70 501 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 HES6Q96HZ4 224 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 FAM81BQ96LP2 452 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ZIM3Q96PE6 472 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 STMN4Q9H169 189 aaPredicted RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 DEFB129Q9H1M3 183 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 EPN3Q9H201 632 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 CARD9Q9H257 536 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 TAOK3Q9H2K8 898 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 BHMT2Q9H2M3 363 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 CNOT10Q9H9A5 744 aaKnown RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 DMAC2Q9NW81 257 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 MAP3K20Q9NYL2 800 aaKnown RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 KCNG1Q9UIX4 513 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 NFU1Q9UMS0 254 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 CDK5RAP2Q96SN8 1893 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 BRWD3Q6RI45 1802 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 LTBP1Q14766 1721 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ASTN1O14525 1302 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 ATAD5Q96QE3 1844 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 NPHP3-ACAD11A0A0J9YXS1 232 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 ANKRD62A6NC57 917 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 TMCO5BA8MYB1 307 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 NDUFAB1O14561 156 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 RAD51CO43502 376 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 RAD21O60216 631 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 GAS7O60861 476 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 PSMD10O75832 226 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 SLC9A1P19634 815 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 NR1D1P20393 614 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 TNFAIP3P21580 790 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 STAT3P40763 770 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 FMO5P49326 533 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 CARSP49589 748 aaKnown RBP8.11□□□□□ -1.11
CFDP1-202ENST00000562602 SCNN1DP51172 638 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
CFDP1-202ENST00000562602 HLTFQ14527 1009 aaKnown RBP eCLIP8.11□□□□□ -1.11
CFDP1-202ENST00000562602 EZH2Q15910 746 aaKnown RBP8.11□□□□□ -1.11
CFDP1-202ENST00000562602 LRCH2Q5VUJ6 765 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 ZNF720Q7Z2F6 126 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 DAAM2Q86T65 1068 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 GSPT2Q8IYD1 628 aaKnown RBP8.11□□□□□ -1.11
CFDP1-202ENST00000562602 C10orf67Q8IYJ2 551 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 SLC30A5Q8TAD4 765 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 CASKIN2Q8WXE0 1202 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 CNKSR1Q969H4 720 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 BORCS6Q96GS4 357 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 MS4A14Q96JA4 679 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 RPS6KC1Q96S38 1066 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 PLVAPQ9BX97 442 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 TEKT3Q9BXF9 490 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 TMBIM4Q9HC24 238 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 LARSQ9P2J5 1176 aaKnown RBP8.11□□□□□ -1.11
CFDP1-202ENST00000562602 USP20Q9Y2K6 914 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 STXBP5LQ9Y2K9 1186 aa8.11□□□□□ -1.11
CFDP1-202ENST00000562602 ZNF536O15090 1300 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 ARHGEF35A5YM69 484 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 ZNF233A6NK53 670 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 FAM86B1E9PN63 330 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 F8VZ95 297 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 PODXLO00592 558 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 NKRFO15226 690 aaKnown RBP eCLIP8.1□□□□□ -1.11
CFDP1-202ENST00000562602 SLITRK3O94933 977 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 ADH1CP00326 375 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 NR3C2P08235 984 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 VIL1P09327 827 aaKnown RBP8.1□□□□□ -1.11
CFDP1-202ENST00000562602 FAM86B2P0C5J1 330 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 SCP2P22307 547 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 INPP5BP32019 993 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 HOXD13P35453 343 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 MDH1P40925 334 aaKnown RBP8.1□□□□□ -1.11
CFDP1-202ENST00000562602 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
CFDP1-202ENST00000562602 NFIAQ12857 509 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 RASA3Q14644 834 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 KIF22Q14807 665 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 PLCB4Q15147 1175 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 CEP55Q53EZ4 464 aa8.1□□□□□ -1.11
CFDP1-202ENST00000562602 TTMPQ5BVD1 217 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms