RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 BLOC1S4Q9NUP1 217 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 PCDHB2Q9Y5E7 798 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 SRPRBQ9Y5M8 271 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 TTLL13PA6NNM8 815 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 GRM6O15303 877 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 SLC26A4O43511 780 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 ZNF623O75123 536 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 EDN1P05305 212 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 RB1P06400 928 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 AXLP30530 894 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 PCBP1Q15365 356 aaKnown RBP eCLIP17■□□□□ 0.31
CCNDBP1-203ENST00000562553 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 ZBTB8OSQ8IWT0 167 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 ABI1Q8IZP0 508 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 DEPTORQ8TB45 409 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 C11orf84Q9BUA3 381 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-203ENST00000562553 CCDC113Q9H0I3 377 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 FZD8Q9H461 694 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 BRWD1Q9NSI6 2320 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 LMCD1Q9NZU5 365 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
CCNDBP1-203ENST00000562553 USP20Q9Y2K6 914 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 MORC2Q9Y6X9 1032 aaPredicted RBP17■□□□□ 0.31
CCNDBP1-203ENST00000562553 BDP1A6H8Y1 2624 aa17■□□□□ 0.31
CCNDBP1-203ENST00000562553 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 CSPG5O95196 566 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 ITGB1P05556 798 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 SKIP12755 728 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 LIG1P18858 919 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 GUCY2CP25092 1073 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 PPP2R5AQ15172 486 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 AAK1Q2M2I8 961 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 SPOUT1Q5T280 376 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 MRPL10Q7Z7H8 261 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 LRRC43Q8N309 656 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 KCTD17Q8N5Z5 321 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 KLHL23Q8NBE8 558 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 LINC00301Q8NCQ3 95 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 IFT74Q96LB3 600 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 PLVAPQ9BX97 442 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 CCSER1Q9C0I3 900 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 C2orf40Q9H1Z8 148 aa16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 PRMT7Q9NVM4 692 aaPredicted RBP16.99■□□□□ 0.31
CCNDBP1-203ENST00000562553 SFI1A8K8P3 1242 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 PRKCBP05771 671 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 BMP1P13497 986 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 PBX3P40426 434 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 PEX3P56589 373 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 MCM6Q14566 821 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 STK38Q15208 465 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 FAM187BQ17R55 369 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 ARSHQ5FYA8 562 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 RASSF8Q8NHQ8 419 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 ADAMTS19Q8TE59 1207 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 RAD54LQ92698 747 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 P2RX5Q93086 422 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 MRPL38Q96DV4 380 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 CCDC51Q96ER9 411 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 PRIMPOLQ96LW4 560 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 PLAGL2Q9UPG8 496 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 HES2Q9Y543 173 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 IPPQ9Y573 584 aa16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 TCF20Q9UGU0 1960 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 TDRD15B5MCY1 1934 aaKnown RBP16.98■□□□□ 0.31
CCNDBP1-203ENST00000562553 CNTNAP2Q9UHC6 1331 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 CCDC169A6NNP5 214 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 OFD1O75665 1012 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 NPTXRO95502 500 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 NCLP19338 710 aaKnown RBP16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 DNAJB1P25685 340 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 NPTX2P47972 431 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 AFF1P51825 1210 aaKnown RBP16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 CAMK1Q14012 370 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 MAPK6Q16659 721 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 GPBP1Q86WP2 473 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 PGBD4Q96DM1 585 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 DRC1Q96MC2 740 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 COG5Q9UP83 839 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 TCHHQ07283 1943 aa16.97■□□□□ 0.31
CCNDBP1-203ENST00000562553 SPTLC2O15270 562 aa16.96■□□□□ 0.31
CCNDBP1-203ENST00000562553 LAG3P18627 525 aa16.96■□□□□ 0.31
CCNDBP1-203ENST00000562553 NCBP1Q09161 790 aaKnown RBP16.96■□□□□ 0.31
CCNDBP1-203ENST00000562553 DMP1Q13316 513 aaPredicted RBP16.96■□□□□ 0.31
CCNDBP1-203ENST00000562553 PRPF4BQ13523 1007 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms