RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.02■□□□□ 0.48
USB1-206ENST00000562534 ELOA2Q8IYF1 753 aaPredicted RBP18.02■□□□□ 0.48
USB1-206ENST00000562534 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 TRAIPQ9BWF2 469 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 CCDC113Q9H0I3 377 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 ST6GALNAC4Q9H4F1 302 aa18.02■□□□□ 0.48
USB1-206ENST00000562534 PIN4Q9Y237 131 aaKnown RBP18.02■□□□□ 0.48
USB1-206ENST00000562534 A0A1B0GUA9 196 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 GTPBP6O43824 516 aaPredicted RBP18.01■□□□□ 0.47
USB1-206ENST00000562534 MGEA5O60502 916 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 TSPAN1O60635 241 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 PRKCBP05771 671 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 ATP2A2P16615 1042 aaKnown RBP18.01■□□□□ 0.47
USB1-206ENST00000562534 PRPF4BQ13523 1007 aaKnown RBP18.01■□□□□ 0.47
USB1-206ENST00000562534 CUL4BQ13620 913 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 AMHR2Q16671 573 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 NOTUMQ6P988 496 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 UNC13DQ70J99 1090 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 ZNF720Q7Z2F6 126 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 CCDC51Q96ER9 411 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 KIFC3Q9BVG8 833 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 MRPL44Q9H9J2 332 aaKnown RBP18.01■□□□□ 0.47
USB1-206ENST00000562534 OLFML3Q9NRN5 406 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
USB1-206ENST00000562534 ADGRA3Q8IWK6 1321 aa18■□□□□ 0.47
USB1-206ENST00000562534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18■□□□□ 0.47
USB1-206ENST00000562534 A0A0U1RQF3 1178 aa18■□□□□ 0.47
USB1-206ENST00000562534 C9IYK1 514 aa18■□□□□ 0.47
USB1-206ENST00000562534 KINO60870 393 aaKnown RBP18■□□□□ 0.47
USB1-206ENST00000562534 NR1I2O75469 434 aa18■□□□□ 0.47
USB1-206ENST00000562534 STAG3L1P0CL83 205 aa18■□□□□ 0.47
USB1-206ENST00000562534 ARF4P18085 180 aaPredicted RBP18■□□□□ 0.47
USB1-206ENST00000562534 LIG1P18858 919 aa18■□□□□ 0.47
USB1-206ENST00000562534 SARSP49591 514 aaKnown RBP18■□□□□ 0.47
USB1-206ENST00000562534 GTF2BQ00403 316 aa18■□□□□ 0.47
USB1-206ENST00000562534 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
USB1-206ENST00000562534 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
USB1-206ENST00000562534 SFR1Q86XK3 245 aa18■□□□□ 0.47
USB1-206ENST00000562534 MYOCDQ8IZQ8 938 aa18■□□□□ 0.47
USB1-206ENST00000562534 BLZF1Q9H2G9 400 aa18■□□□□ 0.47
USB1-206ENST00000562534 ELAC1Q9H777 363 aaKnown RBP18■□□□□ 0.47
USB1-206ENST00000562534 PCDHB7Q9Y5E2 793 aa18■□□□□ 0.47
USB1-206ENST00000562534 ZNF623O75123 536 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 EOMESO95936 686 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 RAB27AP51159 221 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 PSMD2Q13200 908 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 ALCAMQ13740 583 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 TMEM132AQ24JP5 1023 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 STXBP4Q6ZWJ1 553 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 APBB1IPQ7Z5R6 666 aaPredicted RBP17.99■□□□□ 0.47
USB1-206ENST00000562534 HERC6Q8IVU3 1022 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 GRAMD1CQ8IYS0 662 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 LINC01599Q8WXQ3 324 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 CCDC47Q96A33 483 aaKnown RBP17.99■□□□□ 0.47
USB1-206ENST00000562534 FIZ1Q96SL8 496 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 ZBED2Q9BTP6 218 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 MRPL4Q9BYD3 311 aaKnown RBP17.99■□□□□ 0.47
USB1-206ENST00000562534 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 LRFN2Q9ULH4 789 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 TBX20Q9UMR3 447 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 SIP14410 1827 aa17.99■□□□□ 0.47
USB1-206ENST00000562534 K7ENM7 598 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 N4BP3O15049 544 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 CASP1P29466 404 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 NMT1P30419 496 aaKnown RBP17.98■□□□□ 0.47
USB1-206ENST00000562534 DEFB103AP81534 67 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 COASYQ13057 564 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 SLC27A1Q6PCB7 646 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 CPB2Q96IY4 423 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 ADPGKQ9BRR6 497 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 TNFSF13BQ9Y275 285 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
USB1-206ENST00000562534 B4GALT5O43286 388 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 UPP2O95045 317 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 GJB5O95377 273 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 SMAD3P84022 425 aaKnown RBP17.97■□□□□ 0.47
USB1-206ENST00000562534 DPYDQ12882 1025 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 POSTNQ15063 836 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 NT5DC1Q5TFE4 455 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 ATF7IP2Q5U623 682 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 ZPBP2Q6X784 338 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 TAS1R3Q7RTX0 852 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 CRIPAKQ8N1N5 446 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 PGBD4Q96DM1 585 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 RAD9AQ99638 391 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 ACO2Q99798 780 aaKnown RBP17.97■□□□□ 0.47
USB1-206ENST00000562534 STRA6Q9BX79 667 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 TRIM6Q9C030 488 aaPredicted RBP17.97■□□□□ 0.47
USB1-206ENST00000562534 FAM105AQ9NUU6 356 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 TBC1D7Q9P0N9 293 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 EXOC7Q9UPT5 735 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 INSL6Q9Y581 213 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 PCDHB2Q9Y5E7 798 aa17.97■□□□□ 0.47
USB1-206ENST00000562534 KLRC4O43908 158 aa17.96■□□□□ 0.47
USB1-206ENST00000562534 SMC2O95347 1197 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms