RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ABLIM1O14639 778 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 INPPL1O15357 1258 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 SSBP05455 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDH1-204ENST00000562118 ARF4P18085 180 aaPredicted RBP14.81□□□□□ -0.04
CDH1-204ENST00000562118 SNW1Q13573 536 aaKnown RBP14.81□□□□□ -0.04
CDH1-204ENST00000562118 CATSPER4Q7RTX7 472 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 MRPL10Q7Z7H8 261 aaKnown RBP14.81□□□□□ -0.04
CDH1-204ENST00000562118 ZBTB8OSQ8IWT0 167 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 FMR1NBQ8N0W7 255 aaPredicted RBP14.81□□□□□ -0.04
CDH1-204ENST00000562118 RSPH1Q8WYR4 309 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 DHX58Q96C10 678 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 KIFC3Q9BVG8 833 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 PANK2Q9BZ23 570 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 POLD4Q9HCU8 107 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 PTPRHQ9HD43 1115 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 RNF19AQ9NV58 838 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 TMEM161AQ9NX61 479 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 TTLL13PA6NNM8 815 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 GRXCR1A8MXD5 290 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 H0YCG3 227 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 INO80B-WBP1J3KQ70 363 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 B4GALT5O43286 388 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 DGKIO75912 1065 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 EOMESO95936 686 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 PIGRP01833 764 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 MYL1P05976 194 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 GAP43P17677 238 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 PROZP22891 400 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 ABCD1P33897 745 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 RAB27AP51159 221 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 GTF2BQ00403 316 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
CDH1-204ENST00000562118 RAD51AP2Q09MP3 1159 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 RAB30Q15771 203 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 MAPK6Q16659 721 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 LONRF3Q496Y0 759 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 NOTUMQ6P988 496 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 ECHDC2Q86YB7 292 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 FSIP1Q8NA03 581 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 SLC17A8Q8NDX2 589 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 DEPTORQ8TB45 409 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 RAD9AQ99638 391 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 LRRC27Q9C0I9 530 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 KMT5AQ9NQR1 393 aa14.8□□□□□ -0.04
CDH1-204ENST00000562118 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
CDH1-204ENST00000562118 PIN4Q9Y237 131 aaKnown RBP14.8□□□□□ -0.04
CDH1-204ENST00000562118 YBX2Q9Y2T7 364 aaKnown RBP14.8□□□□□ -0.04
CDH1-204ENST00000562118 COL4A4P53420 1690 aaPredicted RBP14.8□□□□□ -0.04
CDH1-204ENST00000562118 DENND3A2RUS2 1198 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 SFI1A8K8P3 1242 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 ERLIN2O94905 339 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 PRKCBP05771 671 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 SKIP12755 728 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 ZSCAN20P17040 1043 aaPredicted RBP14.79□□□□□ -0.04
CDH1-204ENST00000562118 DNAJB2P25686 324 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 PBX2P40425 430 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 SYKP43405 635 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 AMPD3Q01432 767 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 DHX8Q14562 1220 aaKnown RBP14.79□□□□□ -0.04
CDH1-204ENST00000562118 CSPP1Q1MSJ5 1256 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 NT5DC1Q5TFE4 455 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 TMCO2Q7Z6W1 182 aaPredicted RBP14.79□□□□□ -0.04
CDH1-204ENST00000562118 ELOA2Q8IYF1 753 aaPredicted RBP14.79□□□□□ -0.04
CDH1-204ENST00000562118 MYOCDQ8IZQ8 938 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 FAM105AQ9NUU6 356 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 SERTAD1Q9UHV2 236 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 INSL6Q9Y581 213 aa14.79□□□□□ -0.04
CDH1-204ENST00000562118 ATG2AQ2TAZ0 1938 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 SLC16A4O15374 487 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 KLRC4O43908 158 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 TRAK2O60296 914 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 TBCAO75347 108 aaKnown RBP14.78□□□□□ -0.04
CDH1-204ENST00000562118 FAM13AO94988 1023 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 STAG3L1P0CL83 205 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 SMTNP53814 917 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 SLC27A1Q6PCB7 646 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 ZPBP2Q6X784 338 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 KRBA2Q6ZNG9 492 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 DYMQ7RTS9 669 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 ZNF720Q7Z2F6 126 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 MAP4K3Q8IVH8 894 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 SMG8Q8ND04 991 aaKnown RBP14.78□□□□□ -0.04
CDH1-204ENST00000562118 CLP1Q92989 425 aaKnown RBP14.78□□□□□ -0.04
CDH1-204ENST00000562118 HVCN1Q96D96 273 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 PAGE5Q96GU1 130 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 LRCH3Q96II8 777 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 ACO2Q99798 780 aaKnown RBP14.78□□□□□ -0.04
CDH1-204ENST00000562118 TNFSF13BQ9Y275 285 aa14.78□□□□□ -0.04
CDH1-204ENST00000562118 REV3LO60673 3130 aa14.77□□□□□ -0.04
CDH1-204ENST00000562118 CITO14578 2027 aa14.77□□□□□ -0.04
CDH1-204ENST00000562118 TDRD15B5MCY1 1934 aaKnown RBP14.77□□□□□ -0.04
CDH1-204ENST00000562118 PVALEFA0A1B0GWK0 134 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 CCDC169A6NNP5 214 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 K7ERI5 159 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 N4BP3O15049 544 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 ARHGEF15O94989 841 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 ZNF202O95125 648 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 RABGGTBP53611 331 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 FAM160A1Q05DH4 1040 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms