RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 PRPF4BQ13523 1007 aaKnown RBP15.41■□□□□ 0.06
IFT140-205ENST00000561954 ALCAMQ13740 583 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 AMHR2Q16671 573 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 KANK3Q6NY19 840 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
IFT140-205ENST00000561954 STXBP4Q6ZWJ1 553 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 HACE1Q8IYU2 909 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 CNNM3Q8NE01 707 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 TOP1MTQ969P6 601 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 HVCN1Q96D96 273 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 C7orf25Q9BPX7 421 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 ZBED2Q9BTP6 218 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 FZD8Q9H461 694 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 GOLPH3LQ9H4A5 285 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 ELAC1Q9H777 363 aaKnown RBP15.41■□□□□ 0.06
IFT140-205ENST00000561954 OLFML3Q9NRN5 406 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 TMEM161AQ9NX61 479 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 LRFN2Q9ULH4 789 aa15.41■□□□□ 0.06
IFT140-205ENST00000561954 SFI1A8K8P3 1242 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 C9IYK1 514 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 N4BP3O15049 544 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 SLC16A4O15374 487 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 TLL1O43897 1013 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 UBE2HP62256 183 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 HABP4Q5JVS0 413 aaKnown RBP15.4■□□□□ 0.06
IFT140-205ENST00000561954 SLC27A1Q6PCB7 646 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 TMEM161BQ8NDZ6 487 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 DNAJC19Q96DA6 116 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 YME1L1Q96TA2 773 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 MRPL4Q9BYD3 311 aaKnown RBP15.4■□□□□ 0.06
IFT140-205ENST00000561954 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
IFT140-205ENST00000561954 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 SERTAD1Q9UHV2 236 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 HOOK1Q9UJC3 728 aaKnown RBP15.4■□□□□ 0.06
IFT140-205ENST00000561954 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
IFT140-205ENST00000561954 TMEM265A0A087WTH1 108 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 A0A0U1RQF3 1178 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 KINO60870 393 aaKnown RBP15.39■□□□□ 0.05
IFT140-205ENST00000561954 ZNF202O95125 648 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
IFT140-205ENST00000561954 LIG1P18858 919 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 DCAF4L1Q3SXM0 396 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 LONRF3Q496Y0 759 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 HERC4Q5GLZ8 1057 aaPredicted RBP15.39■□□□□ 0.05
IFT140-205ENST00000561954 KRBA2Q6ZNG9 492 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 HAUS6Q7Z4H7 955 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 SFR1Q86XK3 245 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
IFT140-205ENST00000561954 PGBD4Q96DM1 585 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 RAD9AQ99638 391 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 MRPL44Q9H9J2 332 aaKnown RBP15.39■□□□□ 0.05
IFT140-205ENST00000561954 POLD4Q9HCU8 107 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 FAM105AQ9NUU6 356 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 PANK4Q9NVE7 773 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 INSL6Q9Y581 213 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 PCDHB7Q9Y5E2 793 aa15.39■□□□□ 0.05
IFT140-205ENST00000561954 LAMA2P24043 3122 aaKnown RBP15.39■□□□□ 0.05
IFT140-205ENST00000561954 A0A1B0GUA9 196 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 B4GALT5O43286 388 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 GTPBP6O43824 516 aaPredicted RBP15.38■□□□□ 0.05
IFT140-205ENST00000561954 EOMESO95936 686 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 DNAJB2P25686 324 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 HOXA11P31270 313 aaPredicted RBP15.38■□□□□ 0.05
IFT140-205ENST00000561954 AFMP43652 599 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 COASYQ13057 564 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 ATF7IP2Q5U623 682 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 ZPBP2Q6X784 338 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 ECHDC2Q86YB7 292 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 ABI1Q8IZP0 508 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
IFT140-205ENST00000561954 STAMQ92783 540 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 BICD1Q96G01 975 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 PAGE5Q96GU1 130 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 TCHHQ07283 1943 aa15.38■□□□□ 0.05
IFT140-205ENST00000561954 ZMYM2Q9UBW7 1377 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 PVALEFA0A1B0GWK0 134 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 HNRNPDLO14979 420 aaKnown RBP15.37■□□□□ 0.05
IFT140-205ENST00000561954 UPP2O95045 317 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 GCNT3O95395 438 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 FAM189BP81408 668 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 HTRA4P83105 476 aaPredicted RBP15.37■□□□□ 0.05
IFT140-205ENST00000561954 FAM109BQ6ICB4 259 aaPredicted RBP15.37■□□□□ 0.05
IFT140-205ENST00000561954 GPR153Q6NV75 609 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 RTN4RL1Q86UN2 441 aaPredicted RBP15.37■□□□□ 0.05
IFT140-205ENST00000561954 MAP4K3Q8IVH8 894 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 CPB2Q96IY4 423 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 TIGD1Q96MW7 591 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 PBX4Q9BYU1 374 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 PDZD7Q9H5P4 517 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 UBN1Q9NPG3 1134 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 EXOC1Q9NV70 894 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 TBX20Q9UMR3 447 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 EXOC7Q9UPT5 735 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms