RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 PCED1AQ9H1Q7 454 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 IFT22Q9H7X7 185 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 CAAP1Q9H8G2 361 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 USP18Q9UMW8 372 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 GIT1Q9Y2X7 761 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 ST20-MTHFSA0A0A6YYL1 179 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 KLRG2A4D1S0 409 aaPredicted RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 NPIPB8E9PQR5 432 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 NARSO43776 548 aaKnown RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 ALDH1A2O94788 518 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 VIL1P09327 827 aaKnown RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 SLC25A3Q00325 362 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 HHEXQ03014 270 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 KRTAP1-1Q07627 177 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 STRN3Q13033 797 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 ELAVL1Q15717 326 aaKnown RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 CT83Q5H943 113 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 CRB2Q5IJ48 1285 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 FKBP15Q5T1M5 1219 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 KRT40Q6A162 431 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 CCDC62Q6P9F0 684 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 THEMISQ8N1K5 641 aaPredicted RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 ANKRD35Q8N283 1001 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 RSAD2Q8WXG1 361 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 TTC1Q99614 292 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 KCTD10Q9H3F6 313 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 VTA1Q9NP79 307 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 AURKAIP1Q9NWT8 199 aaPredicted RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 RCAN3Q9UKA8 241 aa3.34□□□□□ -1.87
CHD9-204ENST00000561869 NOC2LQ9Y3T9 749 aaKnown RBP3.34□□□□□ -1.87
CHD9-204ENST00000561869 GRXCR1A8MXD5 290 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 CYP27B1O15528 508 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 HOXA3O43365 443 aaPredicted RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 NRP2O60462 931 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 FZD7O75084 574 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 RAB11FIP3O75154 756 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 TMEM127O75204 238 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 LPLP06858 475 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 SOX5P35711 763 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 NPEPPSP55786 919 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 SESN3P58005 492 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 PTH1RQ03431 593 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 PPARAQ07869 468 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 MGAT5Q09328 741 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 MRPL49Q13405 166 aaKnown RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 TOB2Q14106 344 aaPredicted RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 UBE3CQ15386 1083 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 FSCN1Q16658 493 aaKnown RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 FAM214AQ32MH5 1076 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 EGFLAMQ63HQ2 1017 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 MFSD5Q6N075 450 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 ABHD15Q6UXT9 468 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 LHFPL2Q6ZUX7 228 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 KRT26Q7Z3Y9 468 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 CMIPQ8IY22 773 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 LILRA3Q8N6C8 439 aaPredicted RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 MDGA1Q8NFP4 955 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 CHAC2Q8WUX2 184 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 EAF2Q96CJ1 260 aaPredicted RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 ORAI2Q96SN7 254 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 FAM126AQ9BYI3 521 aaPredicted RBP3.33□□□□□ -1.88
CHD9-204ENST00000561869 NCDNQ9UBB6 729 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 HS3ST3A1Q9Y663 406 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 CDY2AQ9Y6F7 541 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 XDHP47989 1333 aa3.33□□□□□ -1.88
CHD9-204ENST00000561869 NRP1O14786 923 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 ULK1O75385 1050 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 LTA4HP09960 611 aaKnown RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 CASRP41180 1078 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 MAN2A2P49641 1150 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 PTTG1IPP53801 180 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 LGALS4P56470 323 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 WNT3AP56704 352 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 STAT4Q14765 748 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 CSRP2Q16527 193 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 LSM12Q3MHD2 195 aaKnown RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 C19orf54Q5BKX5 351 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 TAF7LQ5H9L4 462 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 NAIF1Q69YI7 327 aaPredicted RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 APBB1IPQ7Z5R6 666 aaPredicted RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 OR14C36Q8NHC7 312 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 LMBR1Q8WVP7 490 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 ARL8AQ96BM9 186 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 PLEKHG4BQ96PX9 1271 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 MNTQ99583 582 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 LSM14BQ9BX40 385 aaKnown RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 GPR87Q9BY21 358 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 ZNF341Q9BYN7 854 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 SLKQ9H2G2 1235 aaPredicted RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 SLITRK6Q9H5Y7 841 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 TRPS1Q9UHF7 1281 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 KCNG1Q9UIX4 513 aa3.32□□□□□ -1.88
CHD9-204ENST00000561869 APOBEC2Q9Y235 224 aaKnown RBP3.32□□□□□ -1.88
CHD9-204ENST00000561869 LOC105371045A0A1W2PR82 267 aa3.31□□□□□ -1.88
CHD9-204ENST00000561869 BRINP1O60477 761 aa3.31□□□□□ -1.88
CHD9-204ENST00000561869 ENPP1P22413 925 aa3.31□□□□□ -1.88
CHD9-204ENST00000561869 XPAP23025 273 aaPredicted RBP3.31□□□□□ -1.88
CHD9-204ENST00000561869 CTSSP25774 331 aa3.31□□□□□ -1.88
CHD9-204ENST00000561869 NRG3P56975 720 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms