RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 APOL5Q9BWW9 433 aa28.18■■■□□ 2.1
NME3-202ENST00000561637 CHST12Q9NRB3 414 aa28.18■■■□□ 2.1
NME3-202ENST00000561637 AGPAT5Q9NUQ2 364 aa28.18■■■□□ 2.1
NME3-202ENST00000561637 PPME1Q9Y570 386 aa28.18■■■□□ 2.1
NME3-202ENST00000561637 PTPRZ1P23471 2315 aaPredicted RBP28.18■■■□□ 2.1
NME3-202ENST00000561637 MED24O75448 989 aa28.17■■■□□ 2.1
NME3-202ENST00000561637 EOMESO95936 686 aa28.17■■■□□ 2.1
NME3-202ENST00000561637 FOXP1Q9H334 677 aaPredicted RBP28.17■■■□□ 2.1
NME3-202ENST00000561637 FAM105AQ9NUU6 356 aa28.17■■■□□ 2.1
NME3-202ENST00000561637 DMDP11532 3685 aa28.17■■■□□ 2.1
NME3-202ENST00000561637 VPS13AQ96RL7 3174 aa28.17■■■□□ 2.1
NME3-202ENST00000561637 NT5C1B-RDH14C9J2C7 533 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 FSCN2O14926 492 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 B4GALT3O60512 393 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 HOXA11P31270 313 aaPredicted RBP28.16■■■□□ 2.1
NME3-202ENST00000561637 RARRES1P49788 294 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 HMGN5P82970 282 aaKnown RBP28.16■■■□□ 2.1
NME3-202ENST00000561637 UBXN11Q5T124 520 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 PLPP4Q5VZY2 271 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 SYCE2Q6PIF2 218 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 FAM184AQ8NB25 1140 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 RIPOR3Q96MK2 946 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 ZNF558Q96NG5 402 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 INO80BQ9C086 356 aaPredicted RBP28.16■■■□□ 2.1
NME3-202ENST00000561637 CDH22Q9UJ99 828 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 INPP5FQ9Y2H2 1132 aa28.16■■■□□ 2.1
NME3-202ENST00000561637 TECP42680 631 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 AFF1P51825 1210 aaKnown RBP28.15■■■□□ 2.1
NME3-202ENST00000561637 TTC38Q5R3I4 469 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 ANKRD54Q6NXT1 300 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 TMEM184AQ6ZMB5 413 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 TMEM173Q86WV6 379 aaPredicted RBP28.15■■■□□ 2.1
NME3-202ENST00000561637 CDCA3Q99618 268 aaPredicted RBP28.15■■■□□ 2.1
NME3-202ENST00000561637 TRAIPQ9BWF2 469 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 GPRC5CQ9NQ84 441 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 ANKEF1Q9NU02 776 aa28.15■■■□□ 2.1
NME3-202ENST00000561637 USO1O60763 962 aaKnown RBP28.14■■■□□ 2.1
NME3-202ENST00000561637 OR52Z1P0C646 297 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 CAPSQ13938 189 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 SRGAP1Q7Z6B7 1085 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 CATSPER3Q86XQ3 398 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 NOSTRINQ8IVI9 506 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 SLC39A11Q8N1S5 342 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 TCP11Q8WWU5 503 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 MRPS27Q92552 414 aaKnown RBP28.14■■■□□ 2.1
NME3-202ENST00000561637 IRF2BPLQ9H1B7 796 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 PCDHB2Q9Y5E7 798 aa28.14■■■□□ 2.1
NME3-202ENST00000561637 HIDE1A8MVS5 230 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 RABEP1Q15276 862 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 LLGL2Q6P1M3 1020 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 POTEGQ6S5H5 508 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 AGMOQ6ZNB7 445 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 MAEAQ7L5Y9 396 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 ASCL5Q7RTU5 278 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 C4orf32Q8N8J7 132 aa28.13■■■□□ 2.09
NME3-202ENST00000561637 BCL7CQ8WUZ0 217 aaPredicted RBP28.13■■■□□ 2.09
NME3-202ENST00000561637 GAS2O43903 313 aaKnown RBP28.12■■■□□ 2.09
NME3-202ENST00000561637 GLRA2P23416 452 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 ARL2P36404 184 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 TOB1P50616 345 aaPredicted RBP28.12■■■□□ 2.09
NME3-202ENST00000561637 BCAR1P56945 870 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 PLCB3Q01970 1234 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 ZBTB33Q86T24 672 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 EXOC8Q8IYI6 725 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 CPB2Q96IY4 423 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 POLR3FQ9H1D9 316 aaPredicted RBP28.12■■■□□ 2.09
NME3-202ENST00000561637 TBC1D13Q9NVG8 400 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 SPG21Q9NZD8 308 aa28.12■■■□□ 2.09
NME3-202ENST00000561637 PROB1E7EW31 1015 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 TSPAN1O60635 241 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 ZNF623O75123 536 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 OFD1O75665 1012 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 PTENP60484 403 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 KREMEN2Q8NCW0 462 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 TCF25Q9BQ70 676 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 EIF2AQ9BY44 585 aaKnown RBP28.11■■■□□ 2.09
NME3-202ENST00000561637 DCHS1Q96JQ0 3298 aa28.11■■■□□ 2.09
NME3-202ENST00000561637 RIF1Q5UIP0 2472 aaKnown RBP28.1■■■□□ 2.09
NME3-202ENST00000561637 FSD2A1L4K1 749 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 GALR2O43603 387 aaPredicted RBP28.1■■■□□ 2.09
NME3-202ENST00000561637 ZC3H11AO75152 810 aaKnown RBP eCLIP28.1■■■□□ 2.095e-7■□□□□ 8.5
NME3-202ENST00000561637 DGAT1O75907 488 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 MBTD1Q05BQ5 628 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 GNL2Q13823 731 aaKnown RBP28.1■■■□□ 2.09
NME3-202ENST00000561637 ECM1Q16610 540 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 AMHR2Q16671 573 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 NOMO2Q5JPE7 1267 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 PDE12Q6L8Q7 609 aaKnown RBP28.1■■■□□ 2.09
NME3-202ENST00000561637 CCDC43Q96MW1 224 aaKnown RBP28.1■■■□□ 2.09
NME3-202ENST00000561637 GBP3Q9H0R5 595 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 SMOC2Q9H3U7 446 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 NRDE2Q9H7Z3 1164 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 ENTPD7Q9NQZ7 604 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 DNAJB4Q9UDY4 337 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 LZTS1Q9Y250 596 aa28.1■■■□□ 2.09
NME3-202ENST00000561637 INO80B-WBP1J3KQ70 363 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 ASAP2O43150 1006 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 B4GALT5O43286 388 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 RAB27AP51159 221 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 GLB1LQ6UWU2 654 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms