RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 CSRNP2Q9H175 543 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 LZTS1Q9Y250 596 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 CNTNAP2Q9UHC6 1331 aa17.14■□□□□ 0.33
CCDC113-203ENST00000561517 TRIP11Q15643 1979 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 SPTBN5Q9NRC6 3674 aaKnown RBP17.13■□□□□ 0.33
CCDC113-203ENST00000561517 IRS1P35568 1242 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 PPM1AP35813 382 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 NAMPTP43490 491 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 HYAL1Q12794 435 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 PPP2R5AQ15172 486 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 NOMO2Q5JPE7 1267 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 ZBTB8OSQ8IWT0 167 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 KIFAP3Q92845 792 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 PRIMPOLQ96LW4 560 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 AK8Q96MA6 479 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 PNMA5Q96PV4 448 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 EIF2AQ9BY44 585 aaKnown RBP17.13■□□□□ 0.33
CCDC113-203ENST00000561517 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 FZD8Q9H461 694 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 TBC1D13Q9NVG8 400 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 PRMT7Q9NVM4 692 aaPredicted RBP17.13■□□□□ 0.33
CCDC113-203ENST00000561517 MYH15Q9Y2K3 1946 aa17.13■□□□□ 0.33
CCDC113-203ENST00000561517 VCANP13611 3396 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 CARNS1A5YM72 827 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 FSCN2O14926 492 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 B4GALT5O43286 388 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 SLC26A4O43511 780 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 RESTQ13127 1097 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
CCDC113-203ENST00000561517 CTC1Q2NKJ3 1217 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 LEXMQ3ZCV2 418 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 PDE12Q6L8Q7 609 aaKnown RBP17.12■□□□□ 0.33
CCDC113-203ENST00000561517 SLC39A11Q8N1S5 342 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 MRPS27Q92552 414 aaKnown RBP17.12■□□□□ 0.33
CCDC113-203ENST00000561517 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 RSAD1Q9HA92 442 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 TLR9Q9NR96 1032 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 SPG21Q9NZD8 308 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 IPPQ9Y573 584 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 BDP1A6H8Y1 2624 aa17.12■□□□□ 0.33
CCDC113-203ENST00000561517 INPPL1O15357 1258 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 CSPG5O95196 566 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 KCNA5P22460 613 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 PBX3P40426 434 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 ALDH7A1P49419 539 aaKnown RBP17.11■□□□□ 0.33
CCDC113-203ENST00000561517 BCAR1P56945 870 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 ERVFC1P60507 584 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 RINT1Q6NUQ1 792 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 C1orf186Q6ZWK4 172 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 ADGRD2Q7Z7M1 963 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 ADAMTS19Q8TE59 1207 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 IFT74Q96LB3 600 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 RUSC1Q9BVN2 902 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 NRDE2Q9H7Z3 1164 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 UBN1Q9NPG3 1134 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 PUF60Q9UHX1 559 aaKnown RBP17.11■□□□□ 0.33
CCDC113-203ENST00000561517 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 INPP5FQ9Y2H2 1132 aa17.11■□□□□ 0.33
CCDC113-203ENST00000561517 ITGA4P13612 1032 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC113-203ENST00000561517 LTBRP36941 435 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 AFF1P51825 1210 aaKnown RBP17.1■□□□□ 0.33
CCDC113-203ENST00000561517 KRT17Q04695 432 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 PTPAQ15257 358 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 MAPK6Q16659 721 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 DAW1Q8N136 415 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.1■□□□□ 0.33
CCDC113-203ENST00000561517 DEPTORQ8TB45 409 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 PCDHGC5Q9Y5F6 944 aa17.1■□□□□ 0.33
CCDC113-203ENST00000561517 TTLL13PA6NNM8 815 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 ACKR2O00590 384 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 B4GALT3O60512 393 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 HIP1RO75146 1068 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 PRKCBP05771 671 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 GALTP07902 379 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 GUCY2CP25092 1073 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 EFNA5P52803 228 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 GRIN1Q05586 938 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 RNASELQ05823 741 aaKnown RBP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 MAPK7Q13164 816 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 ADAM15Q13444 863 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 ZRSR1Q15695 479 aaKnown RBP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 CABP7Q86V35 215 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 CDR2LQ86X02 465 aaPredicted RBP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 ZNF280BQ86YH2 543 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms