RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 COL4A3BPQ9Y5P4 624 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 EML1O00423 815 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 CPLX1O14810 134 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 EPB41L2O43491 1005 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 B4GALT3O60512 393 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 DDHD2O94830 711 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 CNPP09543 421 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 HOXA11P31270 313 aaPredicted RBP13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 RFC5P40937 340 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 NBL1P41271 181 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 CLCN4P51793 760 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 PLA2G4FQ68DD2 849 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 C15orf39Q6ZRI6 1047 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 CCDC149Q6ZUS6 474 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 PSPC1Q8WXF1 523 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 MFSD1Q9H3U5 465 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 DHX33Q9H6R0 707 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 VAV3Q9UKW4 847 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 PLXNA3P51805 1871 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 DENND4AQ7Z401 1863 aa13.24□□□□□ -0.29
CARMIL3-204ENST00000561354 ASAP2O43150 1006 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 SLC37A4O43826 429 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 GAS2O43903 313 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 P4HBP07237 508 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 KLRC2P26717 231 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 NPEPPSP55786 919 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 TDGQ13569 410 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 INF2Q27J81 1249 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 UBXN11Q5T124 520 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 PPP4R3AQ6IN85 833 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 CPLX2Q6PUV4 134 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 C4orf19Q8IY42 314 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 CEP170P1Q96L14 293 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 FAM193BQ96PV7 902 aaPredicted RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 MINDY3Q9H8M7 445 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 MRPL17Q9NRX2 175 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
CARMIL3-204ENST00000561354 NRP1O14786 923 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 TBX3O15119 743 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 SOD2P04179 222 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 PCBP1Q15365 356 aaKnown RBP eCLIP13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 LETM2Q2VYF4 491 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 CYP26C1Q6V0L0 522 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 TCP11Q8WWU5 503 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 TMEM143Q96AN5 459 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 UBN1Q9NPG3 1134 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
CARMIL3-204ENST00000561354 CCDC194A0A1B0GVG4 234 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 PRR23AA6NEV1 266 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 INPPL1O15357 1258 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 EFEMP2O95967 443 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 POMCP01189 267 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 URODP06132 367 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 AOC1P19801 751 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 YWHABP31946 246 aaKnown RBP13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 EPHA7Q15375 998 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 CWF19L1Q69YN2 538 aaKnown RBP13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 OTUD6AQ7L8S5 288 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 ASCL5Q7RTU5 278 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 FERMT3Q86UX7 667 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 RNF149Q8NC42 400 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 SMG8Q8ND04 991 aaKnown RBP13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 RPS6KC1Q96S38 1066 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 HERC2P3Q9BVR0 1158 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 TM6SF1Q9BZW5 370 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 KCNK12Q9HB15 430 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 MARCH5Q9NX47 278 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 DUSP12Q9UNI6 340 aa13.21□□□□□ -0.29
CARMIL3-204ENST00000561354 ERLIN2O94905 339 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 C1RP00736 705 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 ADH1AP07327 375 aa13.2□□□□□ -0.3
CARMIL3-204ENST00000561354 ITGA4P13612 1032 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms