RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 POMCP01189 267 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 HARSP12081 509 aaKnown RBP11.17□□□□□ -0.62
HERC1-212ENST00000561348 SKIP12755 728 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 ITGA4P13612 1032 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 ARF4P18085 180 aaPredicted RBP11.17□□□□□ -0.62
HERC1-212ENST00000561348 BMPR1AP36894 532 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 PBX3P40426 434 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 STAT6P42226 847 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
HERC1-212ENST00000561348 NAMPTP43490 491 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 RAB27AP51159 221 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 FAM189BP81408 668 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 CLLU1OSQ5K130 101 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 GLB1LQ6UWU2 654 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 DYMQ7RTS9 669 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
HERC1-212ENST00000561348 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
HERC1-212ENST00000561348 RAD54LQ92698 747 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 SAMD11Q96NU1 681 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
HERC1-212ENST00000561348 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
HERC1-212ENST00000561348 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 MTCH2Q9Y6C9 303 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 NLRC5Q86WI3 1866 aa11.17□□□□□ -0.62
HERC1-212ENST00000561348 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 GRM6O15303 877 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 ZC3H11AO75152 810 aaKnown RBP eCLIP11.16□□□□□ -0.62
HERC1-212ENST00000561348 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
HERC1-212ENST00000561348 EOMESO95936 686 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
HERC1-212ENST00000561348 AKAP5P24588 427 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 HOXA11P31270 313 aaPredicted RBP11.16□□□□□ -0.62
HERC1-212ENST00000561348 NPTX2P47972 431 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 SMTNP53814 917 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 SLC12A3P55017 1021 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 PTPROQ16827 1216 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 HYIQ5T013 277 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 MYCT1Q8N699 235 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 LINC00301Q8NCQ3 95 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 URGCPQ8TCY9 931 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
HERC1-212ENST00000561348 STAMQ92783 540 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 BICD1Q96G01 975 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 CASD1Q96PB1 797 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 ADPGKQ9BRR6 497 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 TCHPQ9BT92 498 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 C11orf84Q9BUA3 381 aaPredicted RBP11.16□□□□□ -0.62
HERC1-212ENST00000561348 IGFLR1Q9H665 355 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 PRMT7Q9NVM4 692 aaPredicted RBP11.16□□□□□ -0.62
HERC1-212ENST00000561348 KLK14Q9P0G3 267 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 CFAP45Q9UL16 551 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 RWDD3Q9Y3V2 267 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 IPPQ9Y573 584 aa11.16□□□□□ -0.62
HERC1-212ENST00000561348 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 H3BNC9 293 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 IDEP14735 1019 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 ATF7P17544 494 aaPredicted RBP11.15□□□□□ -0.62
HERC1-212ENST00000561348 AXLP30530 894 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 NASPP49321 788 aaPredicted RBP11.15□□□□□ -0.62
HERC1-212ENST00000561348 EFNA5P52803 228 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 OSTNP61366 133 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 STRN3Q13033 797 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 NOMO2Q5JPE7 1267 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 SLC27A1Q6PCB7 646 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 SV2BQ7L1I2 683 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 LRRC43Q8N309 656 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 COLGALT1Q8NBJ5 622 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 LRRC15Q8TF66 581 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 ZNF558Q96NG5 402 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 REEP2Q9BRK0 252 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 CCSER1Q9C0I3 900 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
HERC1-212ENST00000561348 RSAD1Q9HA92 442 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 RC3H2Q9HBD1 1191 aaKnown RBP11.15□□□□□ -0.62
HERC1-212ENST00000561348 GDAQ9Y2T3 454 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 MYH15Q9Y2K3 1946 aa11.15□□□□□ -0.62
HERC1-212ENST00000561348 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.63
HERC1-212ENST00000561348 FNDC1Q4ZHG4 1894 aaPredicted RBP11.15□□□□□ -0.63
HERC1-212ENST00000561348 COL4A4P53420 1690 aaPredicted RBP11.14□□□□□ -0.63
HERC1-212ENST00000561348 MYH11P35749 1972 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 CHD9Q3L8U1 2897 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 N4BP3O15049 544 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 LPXNO60711 386 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 CUTAO60888 179 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 YEATS4O95619 227 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 PLS3P13797 630 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 LAG3P18627 525 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 DDIT3P35638 169 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 MLH1P40692 756 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
HERC1-212ENST00000561348 POU5F1BQ06416 359 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms