RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 LRRC55Q6ZSA7 311 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 SLC24A5Q71RS6 500 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 CCDC83Q8IWF9 413 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 DIS3L2Q8IYB7 885 aaKnown RBP8.3□□□□□ -1.08
ZEB1-223ENST00000561304 SPPL3Q8TCT6 385 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 P2RX5Q93086 422 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 DYDC2Q96IM9 177 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 FAM20AQ96MK3 541 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 FDXACB1Q9BRP7 624 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-223ENST00000561304 PLVAPQ9BX97 442 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 TMEM161AQ9NX61 479 aa8.3□□□□□ -1.08
ZEB1-223ENST00000561304 MYH15Q9Y2K3 1946 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 MEIS3P2A8K0S8 358 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 TBX3O15119 743 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 QARSP47897 775 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 EPHA7Q15375 998 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 CLUL1Q15846 466 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 CTC1Q2NKJ3 1217 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 PTCRAQ6ISU1 281 aaPredicted RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 ECHDC2Q86YB7 292 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 RHPN2Q8IUC4 686 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 COLGALT1Q8NBJ5 622 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 POF1BQ8WVV4 589 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 WASF1Q92558 559 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 PABPC5Q96DU9 382 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 SCLT1Q96NL6 688 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 CASD1Q96PB1 797 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 LMAN2LQ9H0V9 348 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 TMEM60Q9H2L4 133 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 DHX33Q9H6R0 707 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 ELAC1Q9H777 363 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 MINDY3Q9H8M7 445 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 IFT122Q9HBG6 1241 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 CYP26B1Q9NR63 512 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 TYW1Q9NV66 732 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 CLDND1Q9NY35 253 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 SUCLA2Q9P2R7 463 aaPredicted RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 RAPGEFL1Q9UHV5 662 aa8.29□□□□□ -1.08
ZEB1-223ENST00000561304 PDCD11Q14690 1871 aaKnown RBP8.29□□□□□ -1.08
ZEB1-223ENST00000561304 A0A087WWV3 80 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 GLP2RO95838 553 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 P4HBP07237 508 aaKnown RBP8.28□□□□□ -1.08
ZEB1-223ENST00000561304 YWHABP31946 246 aaKnown RBP8.28□□□□□ -1.08
ZEB1-223ENST00000561304 RBM10P98175 930 aaKnown RBP8.28□□□□□ -1.08
ZEB1-223ENST00000561304 EMC2Q15006 297 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 LONRF3Q496Y0 759 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 ODR4Q5SWX8 454 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 FAM178BQ8IXR5 827 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 RNF169Q8NCN4 708 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 VN1R2Q8NFZ6 395 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 HELQQ8TDG4 1101 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 LPPQ93052 612 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 TMEM143Q96AN5 459 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 CEP170P1Q96L14 293 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 NLRP4Q96MN2 994 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 MTMR9Q96QG7 549 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 TMEM117Q9H0C3 514 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 IGFLR1Q9H665 355 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 ATP6V0A4Q9HBG4 840 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 XPNPEP1Q9NQW7 623 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
ZEB1-223ENST00000561304 MTCL1Q9Y4B5 1905 aaKnown RBP8.28□□□□□ -1.08
ZEB1-223ENST00000561304 VWA8A3KMH1 1905 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 A0A0U1RQF3 1178 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 B4GALT3O60512 393 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 NEMFO60524 1076 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 FGF18O76093 207 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 SLITRK3O94933 977 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 CD2BP2O95400 341 aaKnown RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 ATP2B1P20020 1258 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 POLGP54098 1239 aaPredicted RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 ERVFC1P60507 584 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 CALCRLQ16602 461 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 NAALADL2Q58DX5 795 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 SPOUT1Q5T280 376 aaKnown RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 ZNF410Q86VK4 478 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 C4orf19Q8IY42 314 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 SLFN12Q8IYM2 578 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 PRPF31Q8WWY3 499 aaKnown RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 NAP1L4Q99733 375 aaKnown RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 EIF2AK1Q9BQI3 630 aaKnown RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 GCOM2Q9BZD3 368 aaPredicted RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 EPHX3Q9H6B9 360 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 TTC12Q9H892 705 aaPredicted RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 CLEC1BQ9P126 229 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 PIN4Q9Y237 131 aaKnown RBP8.27□□□□□ -1.09
ZEB1-223ENST00000561304 COL4A3BPQ9Y5P4 624 aa8.27□□□□□ -1.09
ZEB1-223ENST00000561304 FSCN2O14926 492 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 ZBTB24O43167 697 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-223ENST00000561304 MARCH6O60337 910 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 SRGAP2CP0DJJ0 459 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 ZSCAN20P17040 1043 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-223ENST00000561304 SFPQP23246 707 aaKnown RBP eCLIP8.26□□□□□ -1.095e-7■■■□□ 16.6
ZEB1-223ENST00000561304 MCM7P33993 719 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 TXKP42681 527 aa8.26□□□□□ -1.09
ZEB1-223ENST00000561304 PHKA2P46019 1235 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms