RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 KCND2Q9NZV8 630 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 A0A087X0B3 334 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 SFI1A8K8P3 1242 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 HOXA2O43364 376 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 RB1P06400 928 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 SKIP12755 728 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 IGFBP4P22692 258 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 DDIT3P35638 169 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 PEX3P56589 373 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 RAD51AP2Q09MP3 1159 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 BECN1Q14457 450 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 NOTUMQ6P988 496 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 TAS1R3Q7RTX0 852 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 ZBTB8OSQ8IWT0 167 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 RNF169Q8NCN4 708 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 CCDC51Q96ER9 411 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 IFT74Q96LB3 600 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 DRC1Q96MC2 740 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 NTPCRQ9BSD7 190 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 C17orf75Q9HAS0 396 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 TYW1Q9NV66 732 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 ARHGAP28Q9P2N2 729 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 RCOR1Q9UKL0 485 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 USP20Q9Y2K6 914 aa16.87■□□□□ 0.29
SNRPA1-213ENST00000560856 NLRC5Q86WI3 1866 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 ACKR2O00590 384 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 CTNNB1P35222 781 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 GPBP1Q86WP2 473 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 CDR2LQ86X02 465 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 DEPTORQ8TB45 409 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 HELQQ8TDG4 1101 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 SPIRE2Q8WWL2 714 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 CHAMP1Q96JM3 812 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 LMCD1Q9NZU5 365 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 DAXXQ9UER7 740 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 RWDD3Q9Y3V2 267 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 RALGAPA2Q2PPJ7 1873 aa16.86■□□□□ 0.29
SNRPA1-213ENST00000560856 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 CUTAO60888 179 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 OFD1O75665 1012 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 PRKCBP05771 671 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 AFF1P51825 1210 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 EFNA5P52803 228 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 CACNB1Q02641 598 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 GPM6BQ13491 265 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 GIT2Q14161 759 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 MAPK6Q16659 721 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 LONRF3Q496Y0 759 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 NT5DC1Q5TFE4 455 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 SHC4Q6S5L8 630 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 LARP4BQ92615 738 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 P2RX5Q93086 422 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 TMEM134Q9H6X4 195 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 STK17AQ9UEE5 414 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 IPPQ9Y573 584 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 CNTNAP2Q9UHC6 1331 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 REV3LO60673 3130 aa16.85■□□□□ 0.29
SNRPA1-213ENST00000560856 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 CCDC169A6NNP5 214 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 GRM6O15303 877 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 PLS3P13797 630 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 ZNF131P52739 623 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 CAMK1Q14012 370 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 RRAGBQ5VZM2 374 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 EEF1DP3Q658K8 133 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 CNNM3Q8NE01 707 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 RASSF8Q8NHQ8 419 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 KCNN1Q92952 543 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 PGBD4Q96DM1 585 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 PDZD7Q9H5P4 517 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 KMT5AQ9NQR1 393 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 CCDC39Q9UFE4 941 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 ODF2LQ9ULJ1 636 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 PCDHA7Q9UN72 937 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 PLAGL2Q9UPG8 496 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 HES2Q9Y543 173 aa16.84■□□□□ 0.29
SNRPA1-213ENST00000560856 INPPL1O15357 1258 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 SLC16A4O15374 487 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 ITGB1P05556 798 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 DMP1Q13316 513 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 PRPF4BQ13523 1007 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 E2F4Q16254 413 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 SLC27A1Q6PCB7 646 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 ABI1Q8IZP0 508 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 KLHL23Q8NBE8 558 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 TMEM161BQ8NDZ6 487 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms