RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	KRTAP10-7	P60409	375 aa	Predicted RBP	5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	GUCY1B3	Q02153	619 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	BEAN1	Q3B7T3	259 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	TMEM177	Q53S58	311 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	IGSF22	Q8N9C0	903 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	CPEB3	Q8NE35	698 aa	Known RBP	5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	RPGR	Q92834	1020 aa	Known RBP	5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	BOC	Q9BWV1	1114 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	TEX101	Q9BY14	249 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	TLK1	Q9UKI8	766 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	HDAC5	Q9UQL6	1122 aa		5.45	□□□□□ -1.54
SLTM-223	ENST00000560532	CASR	P41180	1078 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	FOXF2	Q12947	444 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	METTL24	Q5JXM2	366 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	ABHD17C	Q6PCB6	329 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	BRAP	Q7Z569	592 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	OR5M3	Q8NGP4	307 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	DCLRE1C	Q96SD1	692 aa	Known RBP	5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	PDCD2L	Q9BRP1	358 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	SLC29A3	Q9BZD2	475 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	CHST2	Q9Y4C5	530 aa		5.44	□□□□□ -1.54
SLTM-223	ENST00000560532	PIPSL	A2A3N6	862 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	DNAJC9-AS1	A6NH13	148 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	NRP1	O14786	923 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	ABCG1	P45844	678 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	TP53BP2	Q13625	1128 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	MYBPC3	Q14896	1274 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	NAALADL2	Q58DX5	795 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	XYLT1	Q86Y38	959 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	ASB10	Q8WXI3	467 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	C8orf37	Q96NL8	207 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	ENKD1	Q9H0I2	346 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	ACSS2	Q9NR19	701 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	DKK2	Q9UBU2	259 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	SYNPO2	Q9UMS6	1093 aa		5.43	□□□□□ -1.54
SLTM-223	ENST00000560532	GAGE12B	A1L429	117 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	GAGE12H	A6NDE8	117 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	DVL2	O14641	736 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	EFCAB14	O75071	495 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	IGLV2-14	P01704	120 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	BCAR1	P56945	870 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	LONRF2	Q1L5Z9	754 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	PLXDC1	Q8IUK5	500 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	SRRM1	Q8IYB3	904 aa	Known RBP	5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	SLC44A3	Q8N4M1	653 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	GSTCD	Q8NEC7	633 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	CAGE1	Q8TC20	777 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	ZNF384	Q8TF68	577 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	SCLY	Q96I15	445 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	KIAA1586	Q9HCI6	787 aa		5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	TNPO3	Q9Y5L0	923 aa	Known RBP	5.42	□□□□□ -1.54
SLTM-223	ENST00000560532	COL3A1	P02461	1466 aa	Predicted RBP	5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	RBMXL2	O75526	392 aa	Known RBP	5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	ALDH1A2	O94788	518 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	FSBP	O95073	299 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	MATN4	O95460	622 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	KCNA6	P17658	529 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	BMPR1A	P36894	532 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	NHLH2	Q02577	135 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	OTOP1	Q7RTM1	612 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	ARHGEF25	Q86VW2	580 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	IL17RA	Q96F46	866 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	MTG2	Q9H4K7	406 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	PCIF1	Q9H4Z3	704 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	SIRPG	Q9P1W8	387 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	MAP3K2	Q9Y2U5	619 aa		5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	POLR2A	P24928	1970 aa	Known RBP	5.41	□□□□□ -1.54
SLTM-223	ENST00000560532	IKBKB	O14920	756 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	APOL3	O95236	402 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	ESRRB	O95718	433 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	GAA	P10253	952 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	ZSCAN20	P17040	1043 aa	Predicted RBP	5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	DDX6	P26196	483 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	MPP3	Q13368	585 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	MAN2A1	Q16706	1144 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	ABHD17B	Q5VST6	288 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	KRTAP5-11	Q6L8G4	156 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	ZNF366	Q8N895	744 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	C9orf106	Q8NAJ2	232 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	PIK3C3	Q8NEB9	887 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	ADAM2	Q99965	735 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	SOX7	Q9BT81	388 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	DUSP26	Q9BV47	211 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	SPON1	Q9HCB6	807 aa		5.4	□□□□□ -1.54
SLTM-223	ENST00000560532	ALG13	Q9NP73	1137 aa	Known RBP	5.4	□□□□□ -1.54
SLTM-223	ENST00000560532		A0A0A6YYJ9	748 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	TCRBV16S1A1N1	A0A5B0	115 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	PRR5-ARHGAP8	B1AHC4	643 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	SPDEF	O95238	335 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	ITGAM	P11215	1152 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	ADCY2	Q08462	1091 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	MRPL49	Q13405	166 aa	Known RBP	5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	PDCD4	Q53EL6	469 aa	Known RBP	5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	DOK3	Q7L591	496 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	FGD2	Q7Z6J4	655 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	SYT12	Q8IV01	421 aa		5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	NOL10	Q9BSC4	688 aa	Known RBP	5.39	□□□□□ -1.55
SLTM-223	ENST00000560532	OSBPL6	Q9BZF3	934 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms