RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 FANCMQ8IYD8 2048 aa20.02■□□□□ 0.79
TSPAN3-208ENST00000560514 KLF18A0A0U1RQI7 1052 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 CCDC196A0A1B0GTZ2 297 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 NRP1O14786 923 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 LILRB3O75022 631 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 DDHD2O94830 711 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 MYBP10242 640 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 XKR3Q5GH77 459 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 DCLRE1AQ6PJP8 1040 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 MIER3Q7Z3K6 550 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 DCLK2Q8N568 766 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 SHDQ96IW2 340 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 RPS6KC1Q96S38 1066 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 MYADMQ96S97 322 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 JPH2Q9BR39 696 aaPredicted RBP20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 HERC2P3Q9BVR0 1158 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 NIFKQ9BYG3 293 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 DLL3Q9NYJ7 618 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 CNTNAP2Q9UHC6 1331 aa20.01■□□□□ 0.79
TSPAN3-208ENST00000560514 DOCK8Q8NF50 2099 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 TEX28O15482 410 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 POMCP01189 267 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 GLUD2P49448 558 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 FGD1P98174 961 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 RSPO4Q2I0M5 234 aaPredicted RBP20■□□□□ 0.79
TSPAN3-208ENST00000560514 AGMOQ6ZNB7 445 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 RDM1Q8NG50 284 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 PHKBQ93100 1093 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 CCDC136Q96JN2 1154 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 UNC45AQ9H3U1 944 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 NCDNQ9UBB6 729 aa20■□□□□ 0.79
TSPAN3-208ENST00000560514 PRG3Q9Y2Y8 225 aaPredicted RBP20■□□□□ 0.79
TSPAN3-208ENST00000560514 MSH4O15457 936 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 B4GALT3O60512 393 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 RFPL2O75678 378 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 SDHBP21912 280 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 CDC27P30260 824 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 AKAP17AQ02040 695 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 GET4Q7L5D6 327 aaPredicted RBP19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 DHX32Q7L7V1 743 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 LENG9Q96B70 501 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 AGPAT5Q9NUQ2 364 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 OTOGLQ3ZCN5 2332 aa19.99■□□□□ 0.79
TSPAN3-208ENST00000560514 MIA3Q5JRA6 1907 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 MTCL1Q9Y4B5 1905 aaKnown RBP19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 CACNA1IQ9P0X4 2223 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 IGKV6-21A0A0C4DH24 114 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 NR1I2O75469 434 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 LAMP2P13473 410 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 OR1G1P47890 313 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 RCAN1P53805 252 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 KSR1Q8IVT5 923 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 HDAC7Q8WUI4 952 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 SECISBP2LQ93073 1101 aaKnown RBP19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 BORCS6Q96GS4 357 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 SH2D3AQ9BRG2 576 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 ESYT1Q9BSJ8 1104 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 PLEKHA4Q9H4M7 779 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 CEP250Q9BV73 2442 aa19.98■□□□□ 0.79
TSPAN3-208ENST00000560514 TMEM150BA6NC51 233 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 GAS2O43903 313 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 MAFO75444 373 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 SPATA31D3P0C874 917 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 SPATA31D4Q6ZUB0 917 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 MRPL10Q7Z7H8 261 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 GPR161Q8N6U8 529 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 CCDC148Q8NFR7 591 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 PJA1Q8NG27 643 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 SLC5A5Q92911 643 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 CNTNAP3BQ96NU0 1288 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 BCO2Q9BYV7 579 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 CNTNAP3Q9BZ76 1288 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 UBN1Q9NPG3 1134 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 SLC2A4RGQ9NR83 387 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 FAM217BQ9NTX9 383 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 ZDHHC7Q9NXF8 308 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 DLGAP2Q9P1A6 1054 aa19.97■□□□□ 0.79
TSPAN3-208ENST00000560514 NCOR2Q9Y618 2525 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 LAMTOR5O43504 91 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 ADD1P35611 737 aaKnown RBP19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 USP11P51784 963 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 EXOSC10Q01780 885 aaKnown RBP19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 PALB2Q86YC2 1186 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 CNNM3Q8NE01 707 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 FOXQ1Q9C009 403 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 NT5C3AQ9H0P0 336 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 RXFP1Q9HBX9 757 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 SPATA6Q9NWH7 488 aaPredicted RBP19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 ZFP37Q9Y6Q3 630 aaPredicted RBP19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 NUMBLQ9Y6R0 609 aa19.96■□□□□ 0.79
TSPAN3-208ENST00000560514 ITGA4P13612 1032 aa19.95■□□□□ 0.78
TSPAN3-208ENST00000560514 AFF1P51825 1210 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-208ENST00000560514 VARS2Q5ST30 1063 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-208ENST00000560514 KIAA0319Q5VV43 1072 aa19.95■□□□□ 0.78
TSPAN3-208ENST00000560514 TAS1R1Q7RTX1 841 aa19.95■□□□□ 0.78
TSPAN3-208ENST00000560514 SRGAP1Q7Z6B7 1085 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms