RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 INO80B-WBP1J3KQ70 363 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 GAS2O43903 313 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 ERLIN2O94905 339 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 KRT18P05783 430 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 STAG3L1P0CL83 205 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 IGFBP4P22692 258 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 EIF4BP23588 611 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 RPA1P27694 616 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 PRPHP41219 470 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 GPC3P51654 580 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 NCBP1Q09161 790 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 DRP2Q13474 957 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 PDIA5Q14554 519 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 DHX8Q14562 1220 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 GPNMBQ14956 572 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 TCTN1Q2MV58 587 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 CABP7Q86V35 215 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 ZSCAN1Q8NBB4 408 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 RNF149Q8NC42 400 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 PRPF31Q8WWY3 499 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 ARNTL2Q8WYA1 636 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 GAS2L1Q99501 681 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 ADAM2Q99965 735 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 HSD17B14Q9BPX1 270 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 FDXACB1Q9BRP7 624 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 OSBPL7Q9BZF2 842 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 POLR3FQ9H1D9 316 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 BHMT2Q9H2M3 363 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 MTMR6Q9Y217 621 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 YBX2Q9Y2T7 364 aaKnown RBP8.88□□□□□ -0.99
LRRC28-219ENST00000560483 PCDHB7Q9Y5E2 793 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 CLIC4Q9Y696 253 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 SIP14410 1827 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 ARID2Q68CP9 1835 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 GPR32O75388 356 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 CSPG5O95196 566 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 GJB5O95377 273 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 FOSL2P15408 326 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 JUNDP17535 347 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 PHKA2P46019 1235 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 RARRES1P49788 294 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 RAD51AP2Q09MP3 1159 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 LAMTOR4Q0VGL1 99 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 RESTQ13127 1097 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 BTG3Q14201 252 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 MXD4Q14582 209 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 TARBP2Q15633 366 aaKnown RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 PAN2Q504Q3 1202 aaKnown RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 RASIP1Q5U651 963 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 ARL6IP4Q66PJ3 421 aaKnown RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 TWF2Q6IBS0 349 aaKnown RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 ZNF410Q86VK4 478 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 FAM228AQ86W67 206 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 ZBTB8OSQ8IWT0 167 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 ABI1Q8IZP0 508 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 C4orf32Q8N8J7 132 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 MCPH1Q8NEM0 835 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 TMEM40Q8WWA1 233 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 PPM1EQ8WY54 764 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 IFT74Q96LB3 600 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 RAD9AQ99638 391 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 NT5C3AQ9H0P0 336 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 SEMA6BQ9H3T3 888 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 PRDM12Q9H4Q4 367 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 PIN4Q9Y237 131 aaKnown RBP8.87□□□□□ -0.99
LRRC28-219ENST00000560483 INSL6Q9Y581 213 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 SQORQ9Y6N5 450 aa8.87□□□□□ -0.99
LRRC28-219ENST00000560483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 CCDC169A6NNP5 214 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 E9PMD0 336 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 ENPP3O14638 875 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 CAPN5O15484 640 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 ASAP2O43150 1006 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 STBD1O95210 358 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 LYPLA2O95372 231 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 SPATA31C1P0DKV0 1188 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 ZSCAN22P10073 491 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 XRCC6P12956 609 aaKnown RBP eCLIP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 PDIA4P13667 645 aaKnown RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 DARSP14868 501 aaKnown RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 LONRF3Q496Y0 759 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 SPECC1Q5M775 1068 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 FIBCD1Q8N539 461 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 IGSF22Q8N9C0 903 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 DEPTORQ8TB45 409 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 MYLIPQ8WY64 445 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 VWCEQ96DN2 955 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 TRIM6Q9C030 488 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 ADAMTS10Q9H324 1103 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 ZHX3Q9H4I2 956 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 DHX33Q9H6R0 707 aaKnown RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 POLD4Q9HCU8 107 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 ERVK-5Q9HDB9 667 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 GPRC5CQ9NQ84 441 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 C1orf112Q9NSG2 853 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 DACT1Q9NYF0 836 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms