RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	CHRNB2	P17787	502 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ECHS1	P30084	290 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	SSTR3	P32745	418 aa	Predicted RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	USP8	P40818	1118 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	STAT1	P42224	750 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	PAFAH1B1	P43034	410 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	CCT5	P48643	541 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	AARS	P49588	968 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	LIG3	P49916	1009 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMEM132B	Q14DG7	1078 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	RPS6KA1	Q15418	735 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	CFAP221	Q4G0U5	840 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	C2CD6	Q53TS8	623 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	DALRD3	Q5D0E6	543 aa	Known RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ANGEL2	Q5VTE6	544 aa	Known RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	KCTD16	Q68DU8	428 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	SNRNP48	Q6IEG0	339 aa	Known RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	H2AFV	Q71UI9	128 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	HS2ST1	Q7LGA3	356 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	DAAM2	Q86T65	1068 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	NT5DC3	Q86UY8	548 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMEM130	Q8N3G9	435 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	REPS2	Q8NFH8	660 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	RPGRIP1	Q96KN7	1286 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ZIM3	Q96PE6	472 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	WRNIP1	Q96S55	665 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	PI4K2A	Q9BTU6	479 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	STK33	Q9BYT3	514 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMEM117	Q9H0C3	514 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ERVK-5	Q9HDB9	667 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	MED4	Q9NPJ6	270 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMOD4	Q9NZQ9	345 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	APEX2	Q9UBZ4	518 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMEM59L	Q9UK28	342 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ODF2L	Q9ULJ1	636 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	FRMD4B	Q9Y2L6	1034 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	SSC5D	A1L4H1	1573 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMEM110-MUSTN1	A8MSY1	372 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	EDN1	P05305	212 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	BCR	P11274	1271 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	PLS3	P13797	630 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	PTPRA	P18433	802 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	VAMP7	P51809	220 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	HIRA	P54198	1017 aa	Predicted RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ZNF280A	P59817	542 aa	Predicted RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ARHGEF16	Q5VV41	709 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	DAB2IP	Q5VWQ8	1189 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	CHADL	Q6NUI6	762 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ARHGAP27	Q6ZUM4	889 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	CYFIP1	Q7L576	1253 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TAS1R3	Q7RTX0	852 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	SLFN11	Q7Z7L1	901 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	SLC47A2	Q86VL8	602 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	REM2	Q8IYK8	340 aa	Predicted RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ZDHHC14	Q8IZN3	488 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	NLGN2	Q8NFZ4	835 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	OR2W6P	Q8NHA6	318 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	JDP2	Q8WYK2	163 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ALG3	Q92685	438 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	KRT35	Q92764	455 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	TATDN2	Q93075	761 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ACBD3	Q9H3P7	528 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	GDF3	Q9NR23	364 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	GABBR1	Q9UBS5	961 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	AMACR	Q9UHK6	382 aa		6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	ZNF214	Q9UL59	606 aa	Predicted RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	NOC2L	Q9Y3T9	749 aa	Known RBP	6.25	□□□□□ -1.41
LRRC49-223	ENST00000560369	GTPBP10	A4D1E9	387 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	DDX3Y	O15523	660 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	CYP26A1	O43174	497 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	CTNND1	O60716	968 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	NR3C2	P08235	984 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	HOXA7	P31268	230 aa	Predicted RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	NPTX2	P47972	431 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	CNTN2	Q02246	1040 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	ITIH3	Q06033	890 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	NFIL3	Q16649	462 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	SEZ6	Q53EL9	994 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	SWSAP1	Q6NVH7	229 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	PEX26	Q7Z412	305 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	NOP9	Q86U38	636 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	CCDC60	Q8IWA6	550 aa	Predicted RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	RPUSD2	Q8IZ73	545 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	MSL3	Q8N5Y2	521 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	TMEM161B	Q8NDZ6	487 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	SCFD2	Q8WU76	684 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	PPM1E	Q8WY54	764 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	KAT2B	Q92831	832 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	CCDC43	Q96MW1	224 aa	Known RBP	6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	TRIM51	Q9BSJ1	452 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	HAPLN2	Q9GZV7	340 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	XPNPEP1	Q9NQW7	623 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	SEL1L	Q9UBV2	794 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	OTOF	Q9HC10	1997 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	TCRBV7S2A1N4T	A0A589	114 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	GOLGA6B	A6NDN3	693 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	ZNF233	A6NK53	670 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	TTLL13P	A6NNM8	815 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	TTI1	O43156	1089 aa		6.24	□□□□□ -1.41
LRRC49-223	ENST00000560369	MME	P08473	750 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms