RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 TGFB1I1O43294 461 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 PQBP1O60828 265 aaKnown RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 PRKCBP05771 671 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 IQCF3P0C7M6 154 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 CKBP12277 381 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 EIF4BP23588 611 aaKnown RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 SNRPFP62306 86 aaKnown RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 TLE2Q04725 743 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 LRRC63Q05C16 580 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 IQCB1Q15051 598 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 PCBP1Q15365 356 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 AMHR2Q16671 573 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 LRRC26Q2I0M4 334 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 TTI2Q6NXR4 508 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 TRAF7Q6Q0C0 670 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 ENOX1Q8TC92 643 aaKnown RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 FAM200AQ8TCP9 573 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 PRIMPOLQ96LW4 560 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 GBP3Q9H0R5 595 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 CBX8Q9HC52 389 aa14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 PRMT7Q9NVM4 692 aaPredicted RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 CGNQ9P2M7 1197 aaKnown RBP14.98□□□□□ -0.01
HMBOX1-213ENST00000560269 TRIM49BA6NDI0 452 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 IKBKBO14920 756 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 EDN1P05305 212 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 STX17P56962 302 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 MYL5Q02045 173 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 FAAP100Q0VG06 881 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 BFSP2Q13515 415 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 NFIL3Q16649 462 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 ZNF618Q5T7W0 954 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 ANKRD40Q6AI12 368 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 ZPBP2Q6X784 338 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 SYCP3Q8IZU3 236 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 GOLGA5Q8TBA6 731 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 TMEM174Q8WUU8 243 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 TMEM40Q8WWA1 233 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 DUSP9Q99956 384 aaKnown RBP14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 IKZF4Q9H2S9 585 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 GINS2Q9Y248 185 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 SQORQ9Y6N5 450 aa14.97□□□□□ -0.01
HMBOX1-213ENST00000560269 CALUO43852 315 aaPredicted RBP14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 CTSHP09668 335 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 NCAPHQ15003 741 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 EDRF1Q3B7T1 1238 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 FBXO47Q5MNV8 452 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 SPATA1Q5VX52 437 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 DHX40Q8IX18 779 aaKnown RBP14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 C12orf56Q8IXR9 622 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 ZC3H3Q8IXZ2 948 aaKnown RBP14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 ABHD8Q96I13 439 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 TSG101Q99816 390 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 TARS2Q9BW92 718 aaKnown RBP14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 TANC1Q9C0D5 1861 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 AGPAT3Q9NRZ7 376 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 STYXL1Q9Y6J8 313 aa14.96□□□□□ -0.01
HMBOX1-213ENST00000560269 CNTNAP2Q9UHC6 1331 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 TTLL13PA6NNM8 815 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 SMTNL1A8MU46 457 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 ANKRD63C9JTQ0 380 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 B4GALT5O43286 388 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 TSPAN1O60635 241 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 CSDE1O75534 798 aaKnown RBP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 SELPP16109 830 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 SFPQP23246 707 aaKnown RBP eCLIP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 LIG4P49917 911 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 PRPF4BQ13523 1007 aaKnown RBP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 MYBPC2Q14324 1141 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 TSHZ1Q6ZSZ6 1077 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 SLC9A9Q8IVB4 645 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 AOPEPQ8N6M6 819 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 USP38Q8NB14 1042 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 BICD1Q96G01 975 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 ACO2Q99798 780 aaKnown RBP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 NOC4LQ9BVI4 516 aaKnown RBP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 DMAC2Q9NW81 257 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 TBX21Q9UL17 535 aa14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 NOC2LQ9Y3T9 749 aaKnown RBP14.95□□□□□ -0.02
HMBOX1-213ENST00000560269 TISP43B9A030 160 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 TOM1L1O75674 476 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 ERLIN2O94905 339 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 CLTBP09497 229 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 ARF4P18085 180 aaPredicted RBP14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 GARTP22102 1010 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 FGFR4P22455 802 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 PROZP22891 400 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 ADSSP30520 456 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 AXLP30530 894 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 FKBP3Q00688 224 aaKnown RBP14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 SLFN12LQ6IEE8 588 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 LRRC8DQ7L1W4 858 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 CATSPER4Q7RTX7 472 aa14.94□□□□□ -0.02
HMBOX1-213ENST00000560269 LUZP1Q86V48 1076 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms