RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 DNAJC19Q96DA6 116 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 PGBD4Q96DM1 585 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 VWCEQ96DN2 955 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ADAM2Q99965 735 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 MRPL4Q9BYD3 311 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 PANK4Q9NVE7 773 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 EXOC7Q9UPT5 735 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 ZMYM2Q9UBW7 1377 aa13.27□□□□□ -0.29
RABGGTA-215ENST00000560207 A0A1B0GUA9 196 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 PRKCBP05771 671 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 ATP2A2P16615 1042 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 ASIC1P78348 528 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 FAM189BP81408 668 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 GTF2BQ00403 316 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 RAD51AP2Q09MP3 1159 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 COL4A6Q14031 1691 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 DSC3Q14574 896 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 HERC4Q5GLZ8 1057 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 SLC27A1Q6PCB7 646 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 ENGASEQ8NFI3 743 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 GBF1Q92538 1859 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 PAGE5Q96GU1 130 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 PPP1R16BQ96T49 567 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 TMEM206Q9H813 350 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 RMND1Q9NWS8 449 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 PIN4Q9Y237 131 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 INSL6Q9Y581 213 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 PCDHB7Q9Y5E2 793 aa13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-215ENST00000560207 CITO14578 2027 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 UBE4BO95155 1302 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 TMEM265A0A087WTH1 108 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 C9IYK1 514 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 TSPAN1O60635 241 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 SMC2O95347 1197 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 SNRPFP62306 86 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 SLFN12LQ6IEE8 588 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 ZNF720Q7Z2F6 126 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 LRRC15Q8TF66 581 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 BSNDQ8WZ55 320 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 CHAMP1Q96JM3 812 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 TRIM6Q9C030 488 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 TMX1Q9H3N1 280 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 MINDY3Q9H8M7 445 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 MSRAQ9UJ68 235 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 TNFSF13BQ9Y275 285 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 RALGAPA2Q2PPJ7 1873 aa13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 FNDC1Q4ZHG4 1894 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-215ENST00000560207 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 K7ENM7 598 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 KIAA0391O15091 583 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 SLC16A4O15374 487 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 PRPF40AO75400 957 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 GJB5O95377 273 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 AFMP43652 599 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 KCNB1Q14721 858 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 POSTNQ15063 836 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 AMHR2Q16671 573 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 GSDMAQ96QA5 445 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 RAD9AQ99638 391 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 FAM105AQ9NUU6 356 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 TBX20Q9UMR3 447 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 RWDD3Q9Y3V2 267 aa13.24□□□□□ -0.29
RABGGTA-215ENST00000560207 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 TOM1L1O75674 476 aa13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 MBD3O95983 291 aa13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 PIGRP01833 764 aa13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 HOXA11P31270 313 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 PPP1R2P41236 205 aa13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 POU5F1Q01860 360 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-215ENST00000560207 FAM26FQ5R3K3 315 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms