RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 CCDC73Q6ZRK6 1079 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 FBXO22Q8NEZ5 403 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 GDPD5Q8WTR4 605 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 ZNF689Q96CS4 500 aaPredicted RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 CASD1Q96PB1 797 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 REEP2Q9BRK0 252 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 C2orf40Q9H1Z8 148 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 FZD8Q9H461 694 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 AGPAT5Q9NUQ2 364 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 TYW1Q9NV66 732 aaKnown RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 TMEM161AQ9NX61 479 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 FAM13BQ9NYF5 915 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 TBC1D7Q9P0N9 293 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 ATP6V1DQ9Y5K8 247 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 MRPL42Q9Y6G3 142 aaKnown RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 ADGRA3Q8IWK6 1321 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 A0A1B0GVL5 298 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 EDN1P05305 212 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 ITGA4P13612 1032 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 IDEP14735 1019 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 FOSL2P15408 326 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 AKAP5P24588 427 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 NMT1P30419 496 aaKnown RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 BMPR1AP36894 532 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 SMTNP53814 917 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 ERVK-21P61565 698 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 DMP1Q13316 513 aaPredicted RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 EPC2Q52LR7 807 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 NAALADL2Q58DX5 795 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 NT5DC1Q5TFE4 455 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 EEF1DP3Q658K8 133 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 NOTUMQ6P988 496 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 ZBTB33Q86T24 672 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 TMEM192Q8IY95 271 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 CRIPAKQ8N1N5 446 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 KCTD17Q8N5Z5 321 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 DDX12PQ92771 950 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 PGBD4Q96DM1 585 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 GAS2L1Q99501 681 aaPredicted RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 TARS2Q9BW92 718 aaKnown RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 TRIM6Q9C030 488 aaPredicted RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 GBP3Q9H0R5 595 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 ELAC1Q9H777 363 aaKnown RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 PRMT7Q9NVM4 692 aaPredicted RBP9.43□□□□□ -0.9
USP3-217ENST00000560070 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 SERTAD1Q9UHV2 236 aa9.43□□□□□ -0.9
USP3-217ENST00000560070 TMEM265A0A087WTH1 108 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 NT5C1B-RDH14C9J2C7 533 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 ACKR2O00590 384 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 TBCAO75347 108 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 OFD1O75665 1012 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 EOMESO95936 686 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 POMCP01189 267 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 HARSP12081 509 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 SKIP12755 728 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 ATF7P17544 494 aaPredicted RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 CASP1P29466 404 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 AXLP30530 894 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 PBX3P40426 434 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 MATR3P43243 847 aaKnown RBP eCLIP9.42□□□□□ -0.96e-9■■□□□ 14.1
USP3-217ENST00000560070 AFMP43652 599 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 CLCN6P51797 869 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 AFF1P51825 1210 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 EFNA5P52803 228 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 OSTNP61366 133 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 RNASELQ05823 741 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 GPM6BQ13491 265 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 CLLU1OSQ5K130 101 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 RESP18Q5W5W9 173 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 CDCA2Q69YH5 1023 aaPredicted RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 AGMOQ6ZNB7 445 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 LRRC55Q6ZSA7 311 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 GRAMD1CQ8IYS0 662 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 SMG8Q8ND04 991 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 ZBTB45Q96K62 511 aaPredicted RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 TCHPQ9BT92 498 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 TIPINQ9BVW5 301 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 TMEM117Q9H0C3 514 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 ALG13Q9NP73 1137 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 LARSQ9P2J5 1176 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 STK17AQ9UEE5 414 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 RBM19Q9Y4C8 960 aaKnown RBP9.42□□□□□ -0.9
USP3-217ENST00000560070 IPPQ9Y573 584 aa9.42□□□□□ -0.9
USP3-217ENST00000560070 CEP290O15078 2479 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 A0A1B0GUA9 196 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 N4BP3O15049 544 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 GRM6O15303 877 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 TRAK2O60296 914 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 STRN3Q13033 797 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 SEZ6Q53EL9 994 aa9.41□□□□□ -0.9
USP3-217ENST00000560070 ZC2HC1CQ53FD0 456 aaPredicted RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 HERC4Q5GLZ8 1057 aaPredicted RBP9.41□□□□□ -0.9
USP3-217ENST00000560070 NOMO2Q5JPE7 1267 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms