RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 NACC1Q96RE7 527 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 NFKBIZQ9BYH8 718 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 NRDE2Q9H7Z3 1164 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 DBR1Q9UK59 544 aaKnown RBP22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 BARX2Q9UMQ3 279 aaPredicted RBP22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 INPP5FQ9Y2H2 1132 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 HIDE1A8MVS5 230 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 ST18O60284 1047 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 TSPAN1O60635 241 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 USO1O60763 962 aaKnown RBP22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 ZC3H11AO75152 810 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 RPA1P27694 616 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 NCBP1Q09161 790 aaKnown RBP22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 KCNC3Q14003 757 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 TMEM184AQ6ZMB5 413 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 C4orf32Q8N8J7 132 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 CNNM3Q8NE01 707 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 VN1R2Q8NFZ6 395 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 CCDC51Q96ER9 411 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 TMEM169Q96HH4 297 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 RSAD1Q9HA92 442 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 CNTNAP2Q9UHC6 1331 aa22.73■■□□□ 1.23
CHRNA3-207ENST00000559941 INO80B-WBP1J3KQ70 363 aa22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 GALTP07902 379 aa22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 NCLP19338 710 aaKnown RBP22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 COL9A1P20849 921 aa22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 RBM10P98175 930 aaKnown RBP22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 RNASELQ05823 741 aaKnown RBP22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 MBTD1Q05BQ5 628 aa22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 SMC1AQ14683 1233 aaKnown RBP22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 AMHR2Q16671 573 aa22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 NOTUMQ6P988 496 aa22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 POP1Q99575 1024 aaKnown RBP22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 POLR3FQ9H1D9 316 aaPredicted RBP22.72■■□□□ 1.23
CHRNA3-207ENST00000559941 TDRD15B5MCY1 1934 aaKnown RBP22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 MUTP22033 750 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 FXR2P51116 673 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 NBR1Q14596 966 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 POTEGQ6S5H5 508 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 TMEM173Q86WV6 379 aaPredicted RBP22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 MRPL43Q8N983 215 aaKnown RBP22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 SMG8Q8ND04 991 aaKnown RBP22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 MCPH1Q8NEM0 835 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 URGCPQ8TCY9 931 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 IGSF21Q96ID5 467 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 CPB2Q96IY4 423 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 UBN1Q9NPG3 1134 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 KANSL3Q9P2N6 904 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 DNAJB4Q9UDY4 337 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 KIF3AQ9Y496 699 aa22.71■■□□□ 1.23
CHRNA3-207ENST00000559941 TOB1P50616 345 aaPredicted RBP22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 MAEAQ7L5Y9 396 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 ZNF280BQ86YH2 543 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 TMX3Q96JJ7 454 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 LRFN3Q9BTN0 628 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 EIF2AQ9BY44 585 aaKnown RBP22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 GBP3Q9H0R5 595 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 CSRNP2Q9H175 543 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 UPF2Q9HAU5 1272 aaKnown RBP22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 GPRC5CQ9NQ84 441 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 IPPQ9Y573 584 aa22.7■■□□□ 1.22
CHRNA3-207ENST00000559941 C2orf71A6NGG8 1288 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 B4GALT3O60512 393 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 GPR37L1O60883 481 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 DDHD2O94830 711 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 SRGAP2BP0DMP2 458 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 ITGA4P13612 1032 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 ALADP13716 330 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 ARF4P18085 180 aaPredicted RBP22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 SLC11A1P49279 550 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 AFF1P51825 1210 aaKnown RBP22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 BMS1Q14692 1282 aaKnown RBP22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 TMEM31Q5JXX7 168 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 HAUS3Q68CZ6 603 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 DDX53Q86TM3 631 aaKnown RBP22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 VPS52Q8N1B4 723 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 ZBP1Q9H171 429 aa22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 USP15Q9Y4E8 981 aaPredicted RBP22.69■■□□□ 1.22
CHRNA3-207ENST00000559941 INPPL1O15357 1258 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 CXCL14O95715 111 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 PTGDRQ13258 359 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 PDIA5Q14554 519 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 ANKRD54Q6NXT1 300 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 BCL7CQ8WUZ0 217 aaPredicted RBP22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 TMEM175Q9BSA9 504 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 C11orf16Q9NQ32 467 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 LRWD1Q9UFC0 647 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 PCDHB6Q9Y5E3 794 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 IRAK3Q9Y616 596 aa22.68■■□□□ 1.22
CHRNA3-207ENST00000559941 ARHGEF35A5YM69 484 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 LRRIQ4A6NIV6 560 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 ALDH2P05091 517 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 CYP11B2P19099 503 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 CCT6AP40227 531 aaKnown RBP22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 ECM1Q16610 540 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 LLGL2Q6P1M3 1020 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 PADI6Q6TGC4 694 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 IGSF22Q8N9C0 903 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 SUSD6Q92537 303 aa22.67■■□□□ 1.22
CHRNA3-207ENST00000559941 FAM193BQ96PV7 902 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms