RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GNEQ9Y223 722 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 DIS3Q9Y2L1 958 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 SYNRGQ9UMZ2 1314 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 IGSF9BQ9UPX0 1349 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 FAM237AA0A1B0GTK4 181 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 SYCE3A1L190 88 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 WDR64B1ANS9 1081 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 TGFBR3LH3BV60 316 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 M0R082 166 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 BIN1O00499 593 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 CTAGE5O15320 804 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 DYNC1LI2O43237 492 aaPredicted RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 STAM2O75886 525 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 SLITRK3O94933 977 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 GH1P01241 217 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 HMGCRP04035 888 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 MMP3P08254 477 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 XRCC5P13010 732 aaKnown RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 HOXB4P17483 251 aaPredicted RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 GRK4P32298 578 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 TCF7P36402 384 aaPredicted RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 UBA7P41226 1012 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 JAK3P52333 1124 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 NPEPPSP55786 919 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 SOX10P56693 466 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 PRKCEQ02156 737 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 TNFAIP2Q03169 654 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 CUL4BQ13620 913 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 KLHL40Q2TBA0 621 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 DUSP28Q4G0W2 176 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 RRAGBQ5VZM2 374 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 MFSD14CQ5VZR4 134 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 ZNF746Q6NUN9 644 aaPredicted RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 METTL7BQ6UX53 244 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 ABHD15Q6UXT9 468 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 KRBA2Q6ZNG9 492 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 MAEAQ7L5Y9 396 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 CNNM3Q8NE01 707 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 ZNF417Q8TAU3 575 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 TRAPPC12Q8WVT3 735 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 RAD54LQ92698 747 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 HPS3Q969F9 1004 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 PAGE5Q96GU1 130 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 CDHR1Q96JP9 859 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 ZNF587Q96SQ5 575 aaPredicted RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 MPHOSPH6Q99547 160 aaKnown RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 HSD17B14Q9BPX1 270 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 RUSC1Q9BVN2 902 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 FGFBP2Q9BYJ0 223 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 CCSER1Q9C0I3 900 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 MAF1Q9H063 256 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 NUP62CLQ9H1M0 184 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 TBC1D22BQ9NU19 505 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 TCEAL9Q9UHQ7 104 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 NOVA2Q9UNW9 492 aaKnown RBP5.82□□□□□ -1.48
SPG11-220ENST00000559933 PTPN22Q9Y2R2 807 aa5.82□□□□□ -1.48
SPG11-220ENST00000559933 MYMKA6NI61 221 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 RSPH10B2B2RC85 870 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 B4DLN1 442 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 NOP56O00567 594 aaKnown RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 USO1O60763 962 aaKnown RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 KINO60870 393 aaKnown RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 STBD1O95210 358 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 MBD3O95983 291 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 LGALS2P05162 132 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 PSAPP07602 524 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 MYL3P08590 195 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 C6orf222P0C671 652 aaPredicted RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 PLA2G4BP0C869 781 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 RSPH10BP0C881 870 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 AKR1A1P14550 325 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 RPA1P27694 616 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 SLC12A3P55017 1021 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 NEDD9Q14511 834 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 PDIA5Q14554 519 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 EPHA7Q15375 998 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 ZSCAN23Q3MJ62 389 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 MTERF2Q49AM1 385 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 HYIQ5T013 277 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 CCDC183Q5T5S1 534 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 HAUS3Q68CZ6 603 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 MIS18BP1Q6P0N0 1132 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 ANO5Q75V66 913 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 DYMQ7RTS9 669 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 GPBP1Q86WP2 473 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 SMYD4Q8IYR2 804 aaPredicted RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 GLIS3Q8NEA6 775 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 PPTC7Q8NI37 304 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 ERMNQ8TAM6 284 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 LARP4BQ92615 738 aaKnown RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 CALML4Q96GE6 196 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 CDK5RAP3Q96JB5 506 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 ZNF668Q96K58 619 aaPredicted RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 AK8Q96MA6 479 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 PPP1R16BQ96T49 567 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 SENP7Q9BQF6 1050 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 POLR3CQ9BUI4 534 aaPredicted RBP5.81□□□□□ -1.48
SPG11-220ENST00000559933 RAB34Q9BZG1 259 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 BHMT2Q9H2M3 363 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms