RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 USP7Q93009 1102 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 EMC7Q9NPA0 242 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 REXO2Q9Y3B8 237 aaKnown RBP5.28□□□□□ -1.56
SPG11-218ENST00000559754 SUV39H1O43463 412 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 KDM1AO60341 852 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 LY86O95711 162 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 MYCLP1P12525 358 aaPredicted RBP5.27□□□□□ -1.57
SPG11-218ENST00000559754 WNT3AP56704 352 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 PURAQ00577 322 aaKnown RBP5.27□□□□□ -1.57
SPG11-218ENST00000559754 CD69Q07108 199 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 DHCR24Q15392 516 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 DCAF17Q5H9S7 520 aaPredicted RBP5.27□□□□□ -1.57
SPG11-218ENST00000559754 HTR3DQ70Z44 454 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 TAS1R1Q7RTX1 841 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 ELOA2Q8IYF1 753 aaPredicted RBP5.27□□□□□ -1.57
SPG11-218ENST00000559754 PIK3C3Q8NEB9 887 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 SLC5A5Q92911 643 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 EPC1Q9H2F5 836 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 SLITRK6Q9H5Y7 841 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.27□□□□□ -1.57
SPG11-218ENST00000559754 ING3Q9NXR8 418 aa5.27□□□□□ -1.57
SPG11-218ENST00000559754 NOC2LQ9Y3T9 749 aaKnown RBP5.27□□□□□ -1.57
SPG11-218ENST00000559754 XDHP47989 1333 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 WDR33Q9C0J8 1336 aaKnown RBP5.26□□□□□ -1.57
SPG11-218ENST00000559754 A0A087X0B3 334 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 PRSS38A1L453 326 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 ULK1O75385 1050 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 RABGGTBP53611 331 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 MANFP55145 182 aaKnown RBP5.26□□□□□ -1.57
SPG11-218ENST00000559754 ATP13A4Q4VNC1 1196 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 BROXQ5VW32 411 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 IGFL4Q6B9Z1 124 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 RASSF3Q86WH2 238 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 MB21D1Q8N884 522 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 OR5M3Q8NGP4 307 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 OR14C36Q8NHC7 312 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 PAWRQ96IZ0 340 aaKnown RBP5.26□□□□□ -1.57
SPG11-218ENST00000559754 MNTQ99583 582 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 PDCD2LQ9BRP1 358 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 TRIM8Q9BZR9 551 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 SLKQ9H2G2 1235 aaPredicted RBP5.26□□□□□ -1.57
SPG11-218ENST00000559754 MMRN2Q9H8L6 949 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 ING1Q9UK53 422 aaPredicted RBP5.26□□□□□ -1.57
SPG11-218ENST00000559754 TBX22Q9Y458 520 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 PPP2R3BQ9Y5P8 575 aa5.26□□□□□ -1.57
SPG11-218ENST00000559754 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 KLRG2A4D1S0 409 aaPredicted RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 ZEB2O60315 1214 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 PPFIA4O75335 1185 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 PTGS2P35354 604 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 DPTQ07507 201 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 PPARAQ07869 468 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 MGAT5Q09328 741 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 TOB2Q14106 344 aaPredicted RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 METTL24Q5JXM2 366 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 FNDC7Q5VTL7 733 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 NAIF1Q69YI7 327 aaPredicted RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 DDX46Q7L014 1031 aaKnown RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 GLB1L3Q8NCI6 653 aaPredicted RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 NEU4Q8WWR8 484 aaPredicted RBP5.25□□□□□ -1.57
SPG11-218ENST00000559754 ENKD1Q9H0I2 346 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 IFT22Q9H7X7 185 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 PRSS50Q9UI38 385 aa5.25□□□□□ -1.57
SPG11-218ENST00000559754 A0A1W2PR48 441 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 HOXA3O43365 443 aaPredicted RBP5.24□□□□□ -1.57
SPG11-218ENST00000559754 RECQL4O94761 1208 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 LTA4HP09960 611 aaKnown RBP5.24□□□□□ -1.57
SPG11-218ENST00000559754 GYPEP15421 78 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 BPIP17213 487 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 GYS2P54840 703 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 MEF2AQ02078 507 aaPredicted RBP5.24□□□□□ -1.57
SPG11-218ENST00000559754 DUSP2Q05923 314 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 RABL3Q5HYI8 236 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 FAM83AQ86UY5 434 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 CLIP3Q96DZ5 547 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 IL17RAQ96F46 866 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 TTC1Q99614 292 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 CPPED1Q9BRF8 314 aaPredicted RBP5.24□□□□□ -1.57
SPG11-218ENST00000559754 FDXACB1Q9BRP7 624 aaPredicted RBP5.24□□□□□ -1.57
SPG11-218ENST00000559754 ANO3Q9BYT9 981 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 SLC2A4RGQ9NR83 387 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 HDAC5Q9UQL6 1122 aa5.24□□□□□ -1.57
SPG11-218ENST00000559754 APOBEC2Q9Y235 224 aaKnown RBP5.24□□□□□ -1.57
SPG11-218ENST00000559754 TLDC2A0PJX2 215 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 LCHNA4D1U4 455 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 DNAJC6O75061 913 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 SOX5P35711 763 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 CASRP41180 1078 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 GZMKP49863 264 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 INHBCP55103 352 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 SESN3P58005 492 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 MRPL49Q13405 166 aaKnown RBP5.23□□□□□ -1.57
SPG11-218ENST00000559754 CCDC62Q6P9F0 684 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 SLC25A43Q8WUT9 341 aaPredicted RBP5.23□□□□□ -1.57
SPG11-218ENST00000559754 HAS1Q92839 578 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 PGBD4Q96DM1 585 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 ACAP3Q96P50 834 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 PRRX2Q99811 253 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 MS4A5Q9H3V2 200 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 NRDE2Q9H7Z3 1164 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms