RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 KLHL5Q96PQ7 755 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 CYP26B1Q9NR63 512 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 MARCH5Q9NX47 278 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 TCEAL9Q9UHQ7 104 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 PIN4Q9Y237 131 aaKnown RBP12.44□□□□□ -0.42
HERC1-204ENST00000559715 PCDHB2Q9Y5E7 798 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 CACNA1IQ9P0X4 2223 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 INPPL1O15357 1258 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 DEXIO95424 95 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 SFPQP23246 707 aaKnown RBP eCLIP12.43□□□□□ -0.42
HERC1-204ENST00000559715 PSMC5P62195 406 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 AKAP17AQ02040 695 aaKnown RBP12.43□□□□□ -0.42
HERC1-204ENST00000559715 INF2Q27J81 1249 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 EARS2Q5JPH6 523 aaKnown RBP12.43□□□□□ -0.42
HERC1-204ENST00000559715 CWF19L1Q69YN2 538 aaKnown RBP12.43□□□□□ -0.42
HERC1-204ENST00000559715 GLB1LQ6UWU2 654 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 TMC5Q6UXY8 1006 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 ASCL5Q7RTU5 278 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 PHF20Q9BVI0 1012 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 DZANK1Q9NVP4 752 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 MIOSQ9NXC5 875 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 KCNJ14Q9UNX9 436 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 INPP5FQ9Y2H2 1132 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
HERC1-204ENST00000559715 FANCMQ8IYD8 2048 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 NOTCH4Q99466 2003 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 F8W810 466 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 PI15O43692 258 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 GFRA3O60609 400 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 SKIP12755 728 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 NBL1P41271 181 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 QARSP47897 775 aaKnown RBP12.42□□□□□ -0.42
HERC1-204ENST00000559715 DNM2P50570 870 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 RAB27AP51159 221 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 DSC1Q08554 894 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
HERC1-204ENST00000559715 LAMTOR4Q0VGL1 99 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 GIT2Q14161 759 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 ATAT1Q5SQI0 421 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 PPP4R3AQ6IN85 833 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 CATSPER4Q7RTX7 472 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 FAM177A1Q8N128 213 aaPredicted RBP12.42□□□□□ -0.42
HERC1-204ENST00000559715 GSTCDQ8NEC7 633 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 SNX27Q96L92 541 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 NLRP4Q96MN2 994 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 C22orf23Q9BZE7 217 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
HERC1-204ENST00000559715 XPNPEP1Q9NQW7 623 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
HERC1-204ENST00000559715 GPR179Q6PRD1 2367 aa12.42□□□□□ -0.42
HERC1-204ENST00000559715 FAM205CA6NFA0 338 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 NRP1O14786 923 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 CTDNEP1O95476 244 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
HERC1-204ENST00000559715 PSMA5P28066 241 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 CLCN5P51795 746 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 NONOQ15233 471 aaKnown RBP eCLIP12.41□□□□□ -0.42
HERC1-204ENST00000559715 AMHR2Q16671 573 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 KIAA0319Q5VV43 1072 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
HERC1-204ENST00000559715 GALNT17Q6IS24 598 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 SRGAP1Q7Z6B7 1085 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 ZBTB33Q86T24 672 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 C4orf19Q8IY42 314 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 COLGALT2Q8IYK4 626 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 ATOH1Q92858 354 aaPredicted RBP12.41□□□□□ -0.42
HERC1-204ENST00000559715 TNFRSF25Q93038 417 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 FAM20AQ96MK3 541 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 EIF2AQ9BY44 585 aaKnown RBP12.41□□□□□ -0.42
HERC1-204ENST00000559715 TM6SF1Q9BZW5 370 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 GBP3Q9H0R5 595 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 RGL1Q9NZL6 768 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 TRIP11Q15643 1979 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
HERC1-204ENST00000559715 PRR23AA6NEV1 266 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 EPB41L2O43491 1005 aaKnown RBP12.4□□□□□ -0.42
HERC1-204ENST00000559715 POMCP01189 267 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 NEFLP07196 543 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 P4HBP07237 508 aaKnown RBP12.4□□□□□ -0.42
HERC1-204ENST00000559715 SRGAP2CP0DJJ0 459 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 SCRN1Q12765 414 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 ERICH6BQ5W0A0 696 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 FERMT3Q86UX7 667 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 CABP7Q86V35 215 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
HERC1-204ENST00000559715 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 TDRD5Q8NAT2 981 aaKnown RBP12.4□□□□□ -0.42
HERC1-204ENST00000559715 CMASQ8NFW8 434 aaPredicted RBP12.4□□□□□ -0.42
HERC1-204ENST00000559715 ZNF707Q96C28 371 aaPredicted RBP12.4□□□□□ -0.42
HERC1-204ENST00000559715 TMEM175Q9BSA9 504 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
HERC1-204ENST00000559715 SFXN1Q9H9B4 322 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms