RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CST5P28325 142 aaPredicted RBP18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 DNM2P50570 870 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 PRMT2P55345 433 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 MBTD1Q05BQ5 628 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 EXOC8Q8IYI6 725 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 C7orf31Q8N865 590 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 WNT8BQ93098 351 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 CDHR5Q9HBB8 845 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 FGFR1OPO95684 399 aaKnown RBP18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 GPC3P51654 580 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 MARSP56192 900 aaKnown RBP18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 PTENP60484 403 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 UBXN1Q04323 297 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 ARHGEF6Q15052 776 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 MAN2A1Q16706 1144 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 KIZQ2M2Z5 673 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 GDF6Q6KF10 455 aaPredicted RBP18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 CCDC186Q7Z3E2 898 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 CDR2LQ86X02 465 aaPredicted RBP18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 ANKRD20A12PQ8NF67 263 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 DNAJB3Q8WWF6 145 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 KCNN1Q92952 543 aa18.96■□□□□ 0.63
CHRNA3-206ENST00000559658 C17orf102A2RUQ5 167 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 RRN3P2A6NIE6 340 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 EXOC3O60645 756 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 PRKCBP05771 671 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 RPL13P26373 211 aaKnown RBP18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 NLRP11P59045 1033 aaKnown RBP18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 STRN3Q13033 797 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 VWA3BQ502W6 1294 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 ZBTB41Q5SVQ8 909 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 CBWD2Q8IUF1 395 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 SLC9A9Q8IVB4 645 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 C12orf56Q8IXR9 622 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 FAM186BQ8IYM0 893 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 PLEKHO2Q8TD55 490 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 FAM84AQ96KN4 292 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 TMEM134Q9H6X4 195 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 ANKFY1Q9P2R3 1169 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 EXOC7Q9UPT5 735 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 GINS2Q9Y248 185 aa18.95■□□□□ 0.62
CHRNA3-206ENST00000559658 H0YCG3 227 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 INO80B-WBP1J3KQ70 363 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 SLC16A3O15427 465 aaKnown RBP18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 PTMAP06454 111 aaKnown RBP18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 FGFR4P22455 802 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 LIG4P49917 911 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 DCAF17Q5H9S7 520 aaPredicted RBP18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 GOLGA5Q8TBA6 731 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 INO80BQ9C086 356 aaPredicted RBP18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 NDST4Q9H3R1 872 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 ARMCX3Q9UH62 379 aaPredicted RBP18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 TRIM49P0CI25 452 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 TRIM49CP0CI26 452 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 EPB41P11171 864 aaKnown RBP18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 TMOD1P28289 359 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 DLG4P78352 724 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 TFDP1Q14186 410 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 FILIP1LQ4L180 1135 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 SEZ6Q53EL9 994 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 FAM47CQ5HY64 1035 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 ZBTB8OSQ8IWT0 167 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 NLRP7Q8WX94 980 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 POMGNT1Q8WZA1 660 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 SLC35C1Q96A29 364 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 MAP7D2Q96T17 732 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 ADAMTS10Q9H324 1103 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 KCNF1Q9H3M0 494 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 GTF2IRD1Q9UHL9 959 aa18.94■□□□□ 0.62
CHRNA3-206ENST00000559658 KPNA6O60684 536 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 GPR32O75388 356 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 GNA14O95837 355 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 PIGRP01833 764 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 HARSP12081 509 aaKnown RBP18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 PSMC2P35998 433 aaKnown RBP18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 ACLYP53396 1101 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 WNT7BP56706 349 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 APBA1Q02410 837 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 AMHR2Q16671 573 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 FRMD5Q7Z6J6 570 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 XXYLT1Q8NBI6 393 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 FZD8Q9H461 694 aa18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 MKI67P46013 3256 aaKnown RBP18.93■□□□□ 0.62
CHRNA3-206ENST00000559658 SMIM35A0A1B0GVV1 85 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 RNF225M0QZC1 329 aaPredicted RBP18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 ABLIM1O14639 778 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 ZEB2O60315 1214 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 HSPA8P11142 646 aaKnown RBP18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 EFNA5P52803 228 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 LRMPQ12912 555 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 MAPK6Q16659 721 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 EEF1DP3Q658K8 133 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 SPECC1LQ69YQ0 1117 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 TMEM40Q8WWA1 233 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 SCLT1Q96NL6 688 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 OSMRQ99650 979 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 EPHB6O15197 1021 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms