RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 ISCUQ9H1K1 167 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PLEKHA4Q9H4M7 779 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 EHMT1Q9H9B1 1298 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GDF3Q9NR23 364 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 STRN4Q9NRL3 753 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ARMC1Q9NVT9 282 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 SEC63Q9UGP8 760 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 SERTAD1Q9UHV2 236 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 CNOT7Q9UIV1 285 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 ARHGAP26Q9UNA1 814 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 MTO1Q9Y2Z2 717 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 CAB39Q9Y376 341 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 PCDHA5Q9Y5H7 936 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 NWD1Q149M9 1564 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 DIP2BQ9P265 1576 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 TTC34A8MYJ7 566 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 AXIN1O15169 862 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 POLR2DO15514 142 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 ATP9AO75110 1047 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 DAB1O75553 588 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 RPN1P04843 607 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 SERPING1P05155 500 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 CYP21A2P08686 494 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 SNRPA1P09661 255 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 HSPD1P10809 573 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 TMOD1P28289 359 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 MARCKSP29966 332 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 SARSP49591 514 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 LRRC63Q05C16 580 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.54□□□□□ -2
RGPD1-204ENST00000559485 CETN1Q12798 172 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 EPS8Q12929 822 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 MRPL28Q13084 256 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 MAPRE2Q15555 327 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ASIC2Q16515 512 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 TRIM16LQ309B1 348 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ATG16L1Q676U5 607 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 TRMT10CQ7L0Y3 403 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 ERICH1Q86X53 443 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 SRRM1Q8IYB3 904 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 ADSSL1Q8N142 457 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PLBD2Q8NHP8 589 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 IP6K1Q92551 441 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 L3MBTL3Q96JM7 780 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 PNKPQ96T60 521 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PRPF18Q99633 342 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 EPAS1Q99814 870 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 AIFM2Q9BRQ8 373 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 FAM167BQ9BTA0 163 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 NOC4LQ9BVI4 516 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 ZMYND12Q9H0C1 365 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 DDX47Q9H0S4 455 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 GLT8D2Q9H1C3 349 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 NHEJ1Q9H9Q4 299 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 RNPEPL1Q9HAU8 725 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ABCF3Q9NUQ8 709 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PCMTD2Q9NV79 361 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GALNT8Q9NY28 637 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ZMAT5Q9UDW3 170 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 INTUQ9ULD6 942 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 SLC12A4Q9UP95 1085 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GPC6Q9Y625 555 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 SAC3D1A6NKF1 404 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 C16orf96A6NNT2 1141 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PGRMC1O00264 195 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 IGF2BP3O00425 579 aaKnown RBP eCLIP2.54□□□□□ -2
RGPD1-204ENST00000559485 SULT1B1O43704 296 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ITGB3P05106 788 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ESRRAP11474 423 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 SLC5A1P13866 664 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 CPA1P15085 419 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 SP100P23497 879 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 PTPN4P29074 926 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PTGS2P35354 604 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ABL2P42684 1182 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PTDSS1P48651 473 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 AMPD2Q01433 879 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GUCY1A3Q02108 690 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ITGA7Q13683 1181 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 NFE2L1Q14494 772 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 MEA1Q16626 185 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 TTC38Q5R3I4 469 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 PACS1Q6VY07 963 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 LUZP2Q86TE4 346 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GPBP1Q86WP2 473 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 TMEM139Q8IV31 216 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 MB21D2Q8IYB1 491 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 DIS3L2Q8IYB7 885 aaKnown RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 SPARTQ8N0X7 666 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 CACTIN-AS1Q8N1I8 211 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 TTC30BQ8N4P2 665 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 CRACR2BQ8N4Y2 399 aaPredicted RBP2.54□□□□□ -2
RGPD1-204ENST00000559485 ALLCQ8N6M5 410 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GSDMBQ8TAX9 411 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 GIPC2Q8TF65 315 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 NAT14Q8WUY8 206 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 DESI2Q9BSY9 194 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 ZHX3Q9H4I2 956 aa2.54□□□□□ -2
RGPD1-204ENST00000559485 RETREG1Q9H6L5 497 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms