RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 SNRNP35Q16560 246 aaKnown RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 IFI16Q16666 785 aaKnown RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 XKR3Q5GH77 459 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 SLFN11Q7Z7L1 901 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 GLYCTKQ8IVS8 523 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 ARHGEF19Q8IW93 802 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 U2AF1L4Q8WU68 220 aaKnown RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 ARHGAP28Q9P2N2 729 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 MAFBQ9Y5Q3 323 aaPredicted RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 CSADQ9Y600 493 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 NCANO14594 1321 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 IGKV6D-21A0A0A0MT36 114 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 FOXN3O00409 490 aaPredicted RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 PEX10O60683 326 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 LRRN2O75325 713 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 PAFAH1B1P43034 410 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 MXI1P50539 228 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 SP4Q02446 784 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 TAS1R3Q7RTX0 852 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 SULF1Q8IWU6 871 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 ANKRD35Q8N283 1001 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 PROCA1Q8NCQ7 364 aaPredicted RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 TPCN2Q8NHX9 752 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
USP8-208ENST00000559329 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
USP8-208ENST00000559329 GOLGA8IPA6NC78 632 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 GOLGA8JA6NMD2 632 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 IRF6O14896 467 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 ENPEPQ07075 957 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
USP8-208ENST00000559329 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 CCDC181Q5TID7 509 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 PARD3BQ8TEW8 1205 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 MS4A14Q96JA4 679 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 MFSD14AQ96MC6 490 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 COQ4Q9Y3A0 265 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 MYH9P35579 1960 aaKnown RBP17.28■□□□□ 0.36
USP8-208ENST00000559329 SIP14410 1827 aa17.28■□□□□ 0.36
USP8-208ENST00000559329 SOWAHBA6NEL2 793 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 TMEM253P0C7T8 217 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 GALCP54803 685 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 PPATQ06203 517 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 CASP8Q14790 479 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 CYFIP1Q7L576 1253 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 TMC2Q8TDI7 906 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP8-208ENST00000559329 SAAL1Q96ER3 474 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 CEP89Q96ST8 783 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 LRRC1Q9BTT6 524 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 SPATC1LQ9H0A9 340 aa17.27■□□□□ 0.36
USP8-208ENST00000559329 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
USP8-208ENST00000559329 UBE2TQ9NPD8 197 aaPredicted RBP17.27■□□□□ 0.36
USP8-208ENST00000559329 PACSIN2Q9UNF0 486 aaPredicted RBP17.27■□□□□ 0.36
USP8-208ENST00000559329 LRRIQ3A6PVS8 624 aaPredicted RBP17.27■□□□□ 0.35
USP8-208ENST00000559329 SORBS3O60504 671 aa17.27■□□□□ 0.35
USP8-208ENST00000559329 KIF4AO95239 1232 aa17.27■□□□□ 0.35
USP8-208ENST00000559329 GARTP22102 1010 aa17.27■□□□□ 0.35
USP8-208ENST00000559329 IREB2P48200 963 aaKnown RBP17.27■□□□□ 0.35
USP8-208ENST00000559329 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.35
USP8-208ENST00000559329 CCNI2Q6ZMN8 369 aaPredicted RBP17.27■□□□□ 0.35
USP8-208ENST00000559329 RBM12Q9NTZ6 932 aaKnown RBP17.27■□□□□ 0.35
USP8-208ENST00000559329 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.35
USP8-208ENST00000559329 H0YCG3 227 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 CNMDO75829 334 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 OATP04181 439 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
USP8-208ENST00000559329 ABCD1P33897 745 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 EMC2Q15006 297 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 MAP9Q49MG5 647 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.26■□□□□ 0.35
USP8-208ENST00000559329 DHX33Q9H6R0 707 aaKnown RBP17.26■□□□□ 0.35
USP8-208ENST00000559329 ZNF302Q9NR11 478 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
USP8-208ENST00000559329 MYBL2P10244 700 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 GTF2H1P32780 548 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 NOP2P46087 812 aaKnown RBP17.25■□□□□ 0.35
USP8-208ENST00000559329 CYP24A1Q07973 514 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 RPS6KA1Q15418 735 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 TERF2Q15554 542 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 KRT39Q6A163 491 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 PALB2Q86YC2 1186 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 HDAC7Q8WUI4 952 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 IFT74Q96LB3 600 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 AGPAT1Q99943 283 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 NIFKQ9BYG3 293 aaKnown RBP17.25■□□□□ 0.35
USP8-208ENST00000559329 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
USP8-208ENST00000559329 GOLPH3Q9H4A6 298 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 ELP3Q9H9T3 547 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 SPON1Q9HCB6 807 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 TMEM8AQ9HCN3 771 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 DMGDHQ9UI17 866 aaKnown RBP17.25■□□□□ 0.35
USP8-208ENST00000559329 SPDYE5A6NIY4 337 aa17.25■□□□□ 0.35
USP8-208ENST00000559329 CXCL11O14625 94 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms