RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 M0QZ92 97 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 EVI5O60447 810 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 TSPAN1O60635 241 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 MYBP10242 640 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 PROZP22891 400 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 TCTN1Q2MV58 587 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 ZBTB8OSQ8IWT0 167 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 C7orf61Q8IZ16 206 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 DEPTORQ8TB45 409 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 SCLYQ96I15 445 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 PPP1R12CQ9BZL4 782 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 AGPAT5Q9NUQ2 364 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 EXOC1Q9NV70 894 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 PRMT7Q9NVM4 692 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 PADI3Q9ULW8 664 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 COL6A3P12111 3177 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 A0A1B0GUA9 196 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 CCDC169A6NNP5 214 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 K7ENM7 598 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 CSDE1O75534 798 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 KCNA1Q09470 495 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 SLC39A4Q6P5W5 647 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 ZPBP2Q6X784 338 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 C16orf59Q7L2K0 433 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 PPP1R16BQ96T49 567 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 FUCA2Q9BTY2 467 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 KCTD10Q9H3F6 313 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 ST3GAL5Q9UNP4 418 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 GDAQ9Y2T3 454 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
SNRPA1-207ENST00000559309 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 PPP1R3GB7ZBB8 358 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 K7ERI5 159 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 TGFB1I1O43294 461 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 PRKCBP05771 671 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 GHRP10912 638 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 RAG1P15918 1043 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 ARF4P18085 180 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 AXLP30530 894 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 CD52P31358 61 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 CCL23P55773 120 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 MAPK6Q16659 721 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 ZCWPW2Q504Y3 356 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 ADSSL1Q8N142 457 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 ZHX3Q9H4I2 956 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 CHST12Q9NRB3 414 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 TBC1D7Q9P0N9 293 aa16.28■□□□□ 0.2
SNRPA1-207ENST00000559309 INO80B-WBP1J3KQ70 363 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 GPR182O15218 404 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 B4GALT5O43286 388 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 PFKMP08237 780 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 CSF2RAP15509 400 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 FGFR4P22455 802 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 UBXN11Q5T124 520 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 RTN4RL1Q86UN2 441 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 TMEM199Q8N511 208 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 APBB2Q92870 758 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 CCDC47Q96A33 483 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 SYAP1Q96A49 352 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 HAPLN2Q9GZV7 340 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 IL23AQ9NPF7 189 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
SNRPA1-207ENST00000559309 PTPRSQ13332 1948 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 FAM189A1O60320 539 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 MGEA5O60502 916 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 PRPF6O94906 941 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 GCNT3O95395 438 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 ADSSP30520 456 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 PRCPP42785 496 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 NLRP12P59046 1061 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 MCCD1P59942 119 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 SNRPFP62306 86 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 NFIL3Q16649 462 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 C12orf56Q8IXR9 622 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 DBF4BQ8NFT6 615 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 BADQ92934 168 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 CCDC51Q96ER9 411 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 ACCSQ96QU6 501 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms