RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 PLTPP55058 493 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 BYSLQ13895 437 aaKnown RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 TCEAL1Q15170 157 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 EPC2Q52LR7 807 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 C1orf220Q5T0J3 134 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 ZNF746Q6NUN9 644 aaPredicted RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 PADI6Q6TGC4 694 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 MAEAQ7L5Y9 396 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 RPUSD2Q8IZ73 545 aaKnown RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 ZDHHC14Q8IZN3 488 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 PRELID2Q8N945 189 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 FBXO25Q8TCJ0 367 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 ZSWIM1Q9BR11 485 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 GRHL1Q9NZI5 618 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 PFASO15067 1338 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 TMEM110-MUSTN1A8MSY1 372 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 MIF4GDA9UHW6 222 aaKnown RBP17.89■□□□□ 0.46
SPG11-215ENST00000559193 PMS2P54278 862 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 CLUL1Q15846 466 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 MEX3CQ5U5Q3 659 aaKnown RBP17.89■□□□□ 0.46
SPG11-215ENST00000559193 INTS8Q75QN2 995 aaKnown RBP17.89■□□□□ 0.46
SPG11-215ENST00000559193 KAT5Q92993 513 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 RNF25Q96BH1 459 aaPredicted RBP17.89■□□□□ 0.46
SPG11-215ENST00000559193 CBWD1Q9BRT8 395 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 PABPC3Q9H361 631 aaKnown RBP17.89■□□□□ 0.46
SPG11-215ENST00000559193 EHMT1Q9H9B1 1298 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 GOPCQ9HD26 462 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 CHORDC1Q9UHD1 332 aaPredicted RBP17.89■□□□□ 0.46
SPG11-215ENST00000559193 PNMA2Q9UL42 364 aa17.89■□□□□ 0.46
SPG11-215ENST00000559193 MYH11P35749 1972 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 MMP10P09238 476 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 GCLMP48507 274 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 VAMP7P51809 220 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 DRG2P55039 364 aaKnown RBP17.89■□□□□ 0.45
SPG11-215ENST00000559193 TTC27Q6P3X3 843 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 HOOK3Q86VS8 718 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 CCDC13Q8IYE1 715 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 ZSWIM2Q8NEG5 633 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 MDM1Q8TC05 714 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 NEK9Q8TD19 979 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 PLEKHO2Q8TD55 490 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 TATDN2Q93075 761 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 PCDHB18PQ96TA0 734 aa17.89■□□□□ 0.45
SPG11-215ENST00000559193 MRPL11Q9Y3B7 192 aaKnown RBP17.89■□□□□ 0.45
SPG11-215ENST00000559193 SPRED3Q2MJR0 410 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 UBL4BQ8N7F7 174 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 SEC16BQ96JE7 1060 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 CNOT10Q9H9A5 744 aaKnown RBP17.88■□□□□ 0.45
SPG11-215ENST00000559193 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
SPG11-215ENST00000559193 RASAL2Q9UJF2 1139 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 RPTORQ8N122 1335 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 CTNNA2P26232 953 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 CHRNA3P32297 505 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 RPL21P46778 160 aaKnown RBP17.88■□□□□ 0.45
SPG11-215ENST00000559193 GPC5P78333 572 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 DRP2Q13474 957 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 UBAP2Q5T6F2 1119 aaKnown RBP17.88■□□□□ 0.45
SPG11-215ENST00000559193 CABS1Q96KC9 395 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 OSBPL7Q9BZF2 842 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 PKD2L1Q9P0L9 805 aa17.88■□□□□ 0.45
SPG11-215ENST00000559193 HERC5Q9UII4 1024 aaKnown RBP17.88■□□□□ 0.45
SPG11-215ENST00000559193 P4HA2O15460 535 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 ATMINO43313 823 aaPredicted RBP17.87■□□□□ 0.45
SPG11-215ENST00000559193 HSPA6P17066 643 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 CHRNB2P17787 502 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 ITGB5P18084 799 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 COMTP21964 271 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 PEX5P50542 639 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 PLCB4Q15147 1175 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 AOC3Q16853 763 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 RIT2Q99578 217 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 MXRA8Q9BRK3 442 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.87■□□□□ 0.45
SPG11-215ENST00000559193 PCYOX1Q9UHG3 505 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 PCDHA3Q9Y5H8 950 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 PHF20L1A8MW92 1017 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 SGPL1O95470 568 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 DRD4P21917 467 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 ERMARDQ5T6L9 678 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 DENND2CQ68D51 928 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 SAMD1Q6SPF0 538 aaPredicted RBP17.87■□□□□ 0.45
SPG11-215ENST00000559193 C12orf56Q8IXR9 622 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 XPO6Q96QU8 1125 aaKnown RBP17.87■□□□□ 0.45
SPG11-215ENST00000559193 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 TMEM206Q9H813 350 aa17.87■□□□□ 0.45
SPG11-215ENST00000559193 NOCTQ9UK39 431 aaKnown RBP17.87■□□□□ 0.45
SPG11-215ENST00000559193 TCP10L2B9ZVM9 353 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 RTN2O75298 545 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 CETN1Q12798 172 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 MESDQ14696 234 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 NOP9Q86U38 636 aaKnown RBP17.86■□□□□ 0.45
SPG11-215ENST00000559193 CPNE8Q86YQ8 564 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 EPS8L1Q8TE68 723 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 CHURC1Q8WUH1 139 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 TMEM174Q8WUU8 243 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 CD101Q93033 1021 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 VTI1AQ96AJ9 217 aa17.86■□□□□ 0.45
SPG11-215ENST00000559193 PGM2Q96G03 612 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms