RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 FAM129AQ9BZQ8 928 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 OSGEPQ9NPF4 335 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 SERPINB13Q9UIV8 391 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 CCND1P24385 295 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 COPS2P61201 443 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ESRRGP62508 458 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 BASP1P80723 227 aaKnown RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 CDR2Q01850 454 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ITGB3BPQ13352 177 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 MDH1BQ5I0G3 518 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ZNF34Q8IZ26 560 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 HIPK4Q8NE63 616 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 SYN2Q92777 582 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 THAP2Q9H0W7 228 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■■■□□ 18.4
USP3-210ENST00000559192 MKL2Q9ULH7 1088 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 CFAP69A5D8W1 941 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 LRRC10BA6NIK2 292 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 MT-ND3P03897 115 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ATP2B4P23634 1241 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 TARSP26639 723 aaKnown RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 HOXA7P31268 230 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 CACNB3P54284 484 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 PDIA5Q14554 519 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ZC2HC1CQ53FD0 456 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 FIGNQ5HY92 759 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 DTX3LQ8TDB6 740 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 RNF25Q96BH1 459 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 ERP27Q96DN0 273 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 CENPKQ9BS16 269 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 KDM4CQ9H3R0 1056 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 RGL1Q9NZL6 768 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 SUCLA2Q9P2R7 463 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 L3MBTL1Q9Y468 752 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 F8VZ95 297 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 AGPSO00116 658 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 ABCB5Q2M3G0 1257 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 LGSNQ5TDP6 509 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 MSL3Q8N5Y2 521 aaKnown RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 SLC30A5Q8TAD4 765 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 NACC1Q96RE7 527 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 RIOK1Q9BRS2 568 aaKnown RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 LEMD3Q9Y2U8 911 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 EMSYQ7Z589 1322 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 CYP26A1O43174 497 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 FOSP01100 380 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 PON1P27169 355 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 BBS9Q3SYG4 887 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 SYDE2Q5VT97 1194 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 TMEM154Q6P9G4 183 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 C4orf33Q8N1A6 199 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 SYT2Q8N9I0 419 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 NAGPAQ9UK23 515 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 MAD1L1Q9Y6D9 718 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 AKAP12Q02952 1782 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 PITPNM2Q9BZ72 1349 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 RASSF10A6NK89 507 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 PPP1R12AO14974 1030 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 HNRNPDLO14979 420 aaKnown RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 UBOX5O94941 541 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 AKR1B1P15121 316 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 FGFR2P21802 821 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 CRYMQ14894 314 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 IZUMO3Q5VZ72 239 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 SCYL2Q6P3W7 929 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 ZBED8Q8IZ13 594 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 SLC17A8Q8NDX2 589 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 GLIS3Q8NEA6 775 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 PRCCQ92733 491 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 ZBTB10Q96DT7 871 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 MED15Q96RN5 788 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 WNT8AQ9H1J5 351 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 ZWILCHQ9H900 591 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 TCP10L2B9ZVM9 353 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 GOLGA8RI6L899 631 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 LMNB2Q03252 620 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 EVX2Q03828 476 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 ORC2Q13416 577 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 ITIH4Q14624 930 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 QPCTQ16769 361 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 GEN1Q17RS7 908 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 GJC2Q5T442 439 aaPredicted RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 ANKMY2Q8IV38 441 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 PDZD8Q8NEN9 1154 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 C9orf72Q96LT7 481 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 EIF2AK1Q9BQI3 630 aaKnown RBP7.59□□□□□ -1.19
USP3-210ENST00000559192 ANGPTL2Q9UKU9 493 aa7.59□□□□□ -1.19
USP3-210ENST00000559192 TRAPPC3O43617 180 aa7.58□□□□□ -1.2
USP3-210ENST00000559192 HAUS5O94927 633 aa7.58□□□□□ -1.2
USP3-210ENST00000559192 RASA1P20936 1047 aa7.58□□□□□ -1.2
USP3-210ENST00000559192 COMTP21964 271 aa7.58□□□□□ -1.2
USP3-210ENST00000559192 RNASELQ05823 741 aaKnown RBP7.58□□□□□ -1.2
USP3-210ENST00000559192 KRT81Q14533 505 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms