RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SYCE3A1L190 88 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ACKR2O00590 384 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 PSMA7O14818 248 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 TSPAN1O60635 241 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 PPP1R37O75864 691 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 AXLP30530 894 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 MATR3P43243 847 aaKnown RBP eCLIP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 LIG4P49917 911 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 CASP5P51878 434 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 NLRP12P59046 1061 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 NFX1Q12986 1120 aaKnown RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 MBTPS1Q14703 1052 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 STX1AQ16623 288 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 FAM187BQ17R55 369 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ZSCAN23Q3MJ62 389 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ATF7IP2Q5U623 682 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 MFSD5Q6N075 450 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 NOTUMQ6P988 496 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 PPP4R3CPQ6ZMV5 832 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 EPM2AIP1Q7L775 607 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 HS2ST1Q7LGA3 356 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 APBB1IPQ7Z5R6 666 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 DEFB128Q7Z7B8 93 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 FAM228AQ86W67 206 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 NELFCDQ8IXH7 590 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 GUF1Q8N442 669 aaKnown RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 GLIS3Q8NEA6 775 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 GOLGA5Q8TBA6 731 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 SCFD1Q8WVM8 642 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 TMEM40Q8WWA1 233 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 SEPT8Q92599 483 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 APBB2Q92870 758 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 TSG101Q99816 390 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 LBHD1Q9BQE6 289 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 FGFBP2Q9BYJ0 223 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 IFIH1Q9BYX4 1025 aaKnown RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 CCDC113Q9H0I3 377 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 GZF1Q9H116 711 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 FZD8Q9H461 694 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ANO10Q9NW15 660 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ANKFY1Q9P2R3 1169 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ZMYND8Q9ULU4 1186 aaPredicted RBP7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 PADI3Q9ULW8 664 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 ST3GAL5Q9UNP4 418 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 MAPK8IP1Q9UQF2 711 aa7.24□□□□□ -1.25
CHRNA3-204ENST00000559002 TRIP12Q14669 1992 aaPredicted RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 N4BP3O15049 544 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 B4GALT5O43286 388 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 CALUO43852 315 aaPredicted RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 NBNO60934 754 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 PFKMP08237 780 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 CCDC192P0DO97 292 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 HARSP12081 509 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 CSF2RAP15509 400 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 SYN1P17600 705 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ARF4P18085 180 aaPredicted RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ITGB8P26012 769 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 FPGSQ05932 587 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 TYRO3Q06418 890 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 PPIGQ13427 754 aaKnown RBP eCLIP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 AMHR2Q16671 573 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 KNOP1Q1ED39 458 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 BMT2Q1RMZ1 405 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ZNF568Q3ZCX4 644 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 COBLL1Q53SF7 1204 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 TWF2Q6IBS0 349 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 KLHL10Q6JEL2 608 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ZPBP2Q6X784 338 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 FAM43BQ6ZT52 329 aaPredicted RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 TAS1R3Q7RTX0 852 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 RPUSD2Q8IZ73 545 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 MLKLQ8NB16 471 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ZNF507Q8TCN5 953 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 BADQ92934 168 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 KCNN1Q92952 543 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 CCDC51Q96ER9 411 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 CPB2Q96IY4 423 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ACO2Q99798 780 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ADPGKQ9BRR6 497 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 TCHPQ9BT92 498 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ANP32EQ9BTT0 268 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 TARS2Q9BW92 718 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 STRA6Q9BX79 667 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 FTHL17Q9BXU8 183 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 TRIM6Q9C030 488 aaPredicted RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 GBP3Q9H0R5 595 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 AGO3Q9H9G7 860 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 ERVK-5Q9HDB9 667 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 CHST12Q9NRB3 414 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 AGPAT5Q9NUQ2 364 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 EVPLQ92817 2033 aa7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 MKI67P46013 3256 aaKnown RBP7.23□□□□□ -1.25
CHRNA3-204ENST00000559002 BICDL2A1A5D9 508 aa7.22□□□□□ -1.25
CHRNA3-204ENST00000559002 PPP1R3GB7ZBB8 358 aa7.22□□□□□ -1.25
CHRNA3-204ENST00000559002 PDXKO00764 312 aa7.22□□□□□ -1.25
CHRNA3-204ENST00000559002 CLDN3O15551 220 aa7.22□□□□□ -1.25
CHRNA3-204ENST00000559002 TOM1L1O75674 476 aa7.22□□□□□ -1.25
CHRNA3-204ENST00000559002 PIGRP01833 764 aa7.22□□□□□ -1.25
CHRNA3-204ENST00000559002 CXCL10P02778 98 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms