RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TRPV2Q9Y5S1 764 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TTC3P53804 2025 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 PRRC2BQ5JSZ5 2229 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 KDM3AQ9Y4C1 1321 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMEM150BA6NC51 233 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 TIMP2P16035 220 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 CD52P31358 61 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 PTGIRP43119 386 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 CLCN3P51790 818 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 TAP1Q03518 808 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 CLN3Q13286 438 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 TARBP2Q15633 366 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 IER5Q5VY09 327 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 TSHZ1Q6ZSZ6 1077 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 MYOCDQ8IZQ8 938 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 NME8Q8N427 588 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 FBXO18Q8NFZ0 1043 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 APBB2Q92870 758 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMX3Q96JJ7 454 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 CEP89Q96ST8 783 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 BACH2Q9BYV9 841 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 CELF4Q9BZC1 486 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 PRDM12Q9H4Q4 367 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 WRAP73Q9P2S5 460 aaPredicted RBP6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 HRH3Q9Y5N1 445 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 ARID2Q68CP9 1835 aa6.76□□□□□ -1.33
CTDSPL2-204ENST00000558966 COL4A4P53420 1690 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 COL4A6Q14031 1691 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 EPOPA6NHQ4 379 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 KIF28PB7ZC32 967 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 NEMFO60524 1076 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 AMHP03971 560 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 VTNP04004 478 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 FOSL2P15408 326 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 MPSTP25325 297 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 MAPK1P28482 360 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 PSMA6P60900 246 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 CENPCQ03188 943 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 ADGRE1Q14246 886 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 SAFBQ15424 915 aaKnown RBP eCLIP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 XKR3Q5GH77 459 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 FAM117BQ6P1L5 589 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 C16orf46Q6P387 395 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 LRRC71Q8N4P6 559 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 FAM184AQ8NB25 1140 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMEM40Q8WWA1 233 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 RAD9AQ99638 391 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 SH2D3AQ9BRG2 576 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMEM60Q9H2L4 133 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 FOXP1Q9H334 677 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 NRBP2Q9NSY0 501 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 CEP131Q9UPN4 1083 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 VCANP13611 3396 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 BRWD1Q9NSI6 2320 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 TTC28Q96AY4 2481 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 ANKRD33BA6NCL7 494 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 M0QZ92 97 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 CDK2AP1O14519 115 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 MAGEB2O15479 319 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 GPR32O75388 356 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 PSMC5P62195 406 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 HTRA4P83105 476 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 DRP2Q13474 957 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 EPHA7Q15375 998 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 CALCRLQ16602 461 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 KIZQ2M2Z5 673 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMEM266Q2M3C6 531 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 MTERF2Q49AM1 385 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 PLA2G4FQ68DD2 849 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 NCAPH2Q6IBW4 605 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 ANO5Q75V66 913 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 NOSTRINQ8IVI9 506 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 SLFN12Q8IYM2 578 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 METTL13Q8N6R0 699 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 USP38Q8NB14 1042 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 MAFAQ8NHW3 353 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 TOP1MTQ969P6 601 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 MTMR9Q96QG7 549 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 PPP1R16BQ96T49 567 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 NIFKQ9BYG3 293 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMX1Q9H3N1 280 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 CERS4Q9HA82 394 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 RGL1Q9NZL6 768 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 PADI3Q9ULW8 664 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 GINS2Q9Y248 185 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 SQORQ9Y6N5 450 aa6.75□□□□□ -1.33
CTDSPL2-204ENST00000558966 NLRC5Q86WI3 1866 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 IGKV6-21A0A0C4DH24 114 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 LINC01553A4QN01 128 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 ENPP3O14638 875 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 MARCH6O60337 910 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 MGEA5O60502 916 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 UPP2O95045 317 aa6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 BAG4O95429 457 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 P4HBP07237 508 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-204ENST00000558966 ATP2B1P20020 1258 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms