RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 POLR3FQ9H1D9 316 aaPredicted RBP16.8■□□□□ 0.28
SMAD6-203ENST00000558937 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
SMAD6-203ENST00000558937 TUFT1Q9NNX1 390 aa16.8■□□□□ 0.28
SMAD6-203ENST00000558937 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
SMAD6-203ENST00000558937 INO80B-WBP1J3KQ70 363 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 B4GALT3O60512 393 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 TECP42680 631 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 MBTD1Q05BQ5 628 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 GNL2Q13823 731 aaKnown RBP16.79■□□□□ 0.28
SMAD6-203ENST00000558937 KCNC3Q14003 757 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 SMC1AQ14683 1233 aaKnown RBP16.79■□□□□ 0.28
SMAD6-203ENST00000558937 RABEP1Q15276 862 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 NOSTRINQ8IVI9 506 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 URGCPQ8TCY9 931 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 BCL7CQ8WUZ0 217 aaPredicted RBP16.79■□□□□ 0.28
SMAD6-203ENST00000558937 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
SMAD6-203ENST00000558937 GBP3Q9H0R5 595 aa16.79■□□□□ 0.28
SMAD6-203ENST00000558937 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 GPR37L1O60883 481 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 GALTP07902 379 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 XRCC6P12956 609 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 AXLP30530 894 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 TRAPPC10P48553 1259 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 SLC11A1P49279 550 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 RNASELQ05823 741 aaKnown RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 POU5F1BQ06416 359 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 NBR1Q14596 966 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 AMHR2Q16671 573 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 TMEM184AQ6ZMB5 413 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 SMG8Q8ND04 991 aaKnown RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 CCDC51Q96ER9 411 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 IGSF21Q96ID5 467 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 POLR3CQ9BUI4 534 aaPredicted RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 EIF2AQ9BY44 585 aaKnown RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 ZBP1Q9H171 429 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 DNAJB4Q9UDY4 337 aa16.78■□□□□ 0.28
SMAD6-203ENST00000558937 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
SMAD6-203ENST00000558937 CARNS1A5YM72 827 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 DCXO43602 365 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 SRGAP2BP0DMP2 458 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 ALADP13716 330 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 AFF1P51825 1210 aaKnown RBP16.77■□□□□ 0.28
SMAD6-203ENST00000558937 ANKRD54Q6NXT1 300 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 NOTUMQ6P988 496 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 MAEAQ7L5Y9 396 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 ZNF280BQ86YH2 543 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 MRPL43Q8N983 215 aaKnown RBP16.77■□□□□ 0.28
SMAD6-203ENST00000558937 CNNM3Q8NE01 707 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 ERMNQ8TAM6 284 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 CSRNP2Q9H175 543 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 IPPQ9Y573 584 aa16.77■□□□□ 0.28
SMAD6-203ENST00000558937 DDHD2O94830 711 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 ITGA4P13612 1032 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-203ENST00000558937 RPA1P27694 616 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 CA8P35219 290 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 SYCE2Q6PIF2 218 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
SMAD6-203ENST00000558937 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 MCPH1Q8NEM0 835 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 AUTS2Q8WXX7 1259 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 SUSD6Q92537 303 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 NACC1Q96RE7 527 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 VN1R3Q9BXE9 311 aa16.76■□□□□ 0.27
SMAD6-203ENST00000558937 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
SMAD6-203ENST00000558937 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.75■□□□□ 0.27
SMAD6-203ENST00000558937 LRRIQ4A6NIV6 560 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 B4GALT5O43286 388 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 ST18O60284 1047 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 CLASP2O75122 1294 aaKnown RBP16.75■□□□□ 0.27
SMAD6-203ENST00000558937 CXCL14O95715 111 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 POMCP01189 267 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 CTSAP10619 480 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMAD6-203ENST00000558937 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMAD6-203ENST00000558937 NCBP1Q09161 790 aaKnown RBP16.75■□□□□ 0.27
SMAD6-203ENST00000558937 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
SMAD6-203ENST00000558937 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 CASP10Q92851 521 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 TMEM175Q9BSA9 504 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 APOL5Q9BWW9 433 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 S1PR5Q9H228 398 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 KANSL3Q9P2N6 904 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 HES2Q9Y543 173 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 HCFC2Q9Y5Z7 792 aa16.75■□□□□ 0.27
SMAD6-203ENST00000558937 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
SMAD6-203ENST00000558937 LOC730098B7Z3J9 87 aa16.74■□□□□ 0.27
SMAD6-203ENST00000558937 INPPL1O15357 1258 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms