RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ST3GAL1Q11201 340 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 ANKRD54Q6NXT1 300 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 ASCL5Q7RTU5 278 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 TMC7Q7Z402 723 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
CASC4-205ENST00000558735 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
CASC4-205ENST00000558735 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 FAM186AA6NE01 2351 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 GVINP1Q7Z2Y8 2422 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 PRR23AA6NEV1 266 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 ASAP2O43150 1006 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 CXCL14O95715 111 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 GALTP07902 379 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 SKIP12755 728 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 RFC5P40937 340 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
CASC4-205ENST00000558735 NOMO2Q5JPE7 1267 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 AGMOQ6ZNB7 445 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 DIS3L2Q8IYB7 885 aaKnown RBP12.86□□□□□ -0.35
CASC4-205ENST00000558735 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
CASC4-205ENST00000558735 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
CASC4-205ENST00000558735 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 TTC12Q9H892 705 aaPredicted RBP12.86□□□□□ -0.35
CASC4-205ENST00000558735 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
CASC4-205ENST00000558735 AGPAT5Q9NUQ2 364 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 TBC1D13Q9NVG8 400 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 NR2E1Q9Y466 385 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 PCDHB2Q9Y5E7 798 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 FRYLO94915 3013 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 DMXL1Q9Y485 3027 aa12.86□□□□□ -0.35
CASC4-205ENST00000558735 A0A087WWV3 80 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 C2orf71A6NGG8 1288 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 LYPLA2O95372 231 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 PDGFBP01127 241 aaPredicted RBP12.85□□□□□ -0.35
CASC4-205ENST00000558735 TECP42680 631 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 TXKP42681 527 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 RAB27AP51159 221 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 FOSBP53539 338 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 EMC2Q15006 297 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 CALCRLQ16602 461 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 UBXN11Q5T124 520 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 GLB1LQ6UWU2 654 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 TMEM173Q86WV6 379 aaPredicted RBP12.85□□□□□ -0.35
CASC4-205ENST00000558735 ZNF280BQ86YH2 543 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 TCP11Q8WWU5 503 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 SORCS3Q9UPU3 1222 aa12.85□□□□□ -0.35
CASC4-205ENST00000558735 GAS2O43903 313 aaKnown RBP12.84□□□□□ -0.35
CASC4-205ENST00000558735 B4GALT3O60512 393 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
CASC4-205ENST00000558735 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.35
CASC4-205ENST00000558735 DDHD2O94830 711 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 PTENP60484 403 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 ITIH3Q06033 890 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 MTMR3Q13615 1198 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
CASC4-205ENST00000558735 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 DDX53Q86TM3 631 aaKnown RBP12.84□□□□□ -0.35
CASC4-205ENST00000558735 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 TMEM105Q8N8V8 129 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 BCL7CQ8WUZ0 217 aaPredicted RBP12.84□□□□□ -0.35
CASC4-205ENST00000558735 RSPH1Q8WYR4 309 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 IGSF21Q96ID5 467 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 NECTIN4Q96NY8 510 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 APOL5Q9BWW9 433 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 INPP5FQ9Y2H2 1132 aa12.84□□□□□ -0.35
CASC4-205ENST00000558735 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
CASC4-205ENST00000558735 BRD1O95696 1058 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 ALDH2P05091 517 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 SPATA31C1P0DKV0 1188 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
CASC4-205ENST00000558735 ARL2P36404 184 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 SLC11A1P49279 550 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 CLCN5P51795 746 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 RNASELQ05823 741 aaKnown RBP12.83□□□□□ -0.36
CASC4-205ENST00000558735 POU5F1BQ06416 359 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 TRIM29Q14134 588 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
CASC4-205ENST00000558735 TPRNQ4KMQ1 711 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
CASC4-205ENST00000558735 SMG8Q8ND04 991 aaKnown RBP12.83□□□□□ -0.36
CASC4-205ENST00000558735 PIGOQ8TEQ8 1089 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 AUTS2Q8WXX7 1259 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 TMEM169Q96HH4 297 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 MTRQ99707 1265 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 VN1R3Q9BXE9 311 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms