RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CKMP06732 381 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 HSPA1AP0DMV8 641 aaKnown RBP11.67□□□□□ -0.54
MARK3-213ENST00000558611 HSPA1BP0DMV9 641 aaKnown RBP11.67□□□□□ -0.54
MARK3-213ENST00000558611 CACNB3P54284 484 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 MECOMQ03112 1051 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 KCNAB2Q13303 367 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 ATP13A4Q4VNC1 1196 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 FKBP1CQ5VVH2 108 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 IQCEQ6IPM2 695 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 C22orf34Q6ZV56 151 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 ARMC9Q7Z3E5 817 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 DAGLBQ8NCG7 672 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 GIMAP7Q8NHV1 300 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 ZNF384Q8TF68 577 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 DUSP23Q9BVJ7 150 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 HDAC8Q9BY41 377 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 TMEM39BQ9GZU3 492 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 GPRC5CQ9NQ84 441 aa11.67□□□□□ -0.54
MARK3-213ENST00000558611 PRDM5Q9NQX1 630 aaPredicted RBP11.67□□□□□ -0.54
MARK3-213ENST00000558611 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
MARK3-213ENST00000558611 FAM155AB1AL88 458 aaPredicted RBP11.66□□□□□ -0.54
MARK3-213ENST00000558611 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 MEIS1O00470 390 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 GLB1P16278 677 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 MAP2K2P36507 400 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 PAK1Q13153 545 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 NOGQ13253 232 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 PRKG1Q13976 671 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 SUPT20HL1Q3ZLR7 823 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 SGO2Q562F6 1265 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 SHISA2Q6UWI4 295 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 RASAL3Q86YV0 1011 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 LENG1Q96BZ8 264 aaPredicted RBP11.66□□□□□ -0.54
MARK3-213ENST00000558611 NSUN4Q96CB9 384 aaKnown RBP11.66□□□□□ -0.54
MARK3-213ENST00000558611 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 FCRL3Q96P31 734 aaPredicted RBP11.66□□□□□ -0.54
MARK3-213ENST00000558611 RHOBTB2Q9BYZ6 727 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 EMC7Q9NPA0 242 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 C1GALT1Q9NS00 363 aa11.66□□□□□ -0.54
MARK3-213ENST00000558611 WNT9AO14904 365 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 GSTO1P78417 241 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 GFOD2Q3B7J2 385 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 CRTC3Q6UUV7 619 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 C11orf74Q86VG3 221 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 ZNF655Q8N720 491 aaPredicted RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 CHST14Q8NCH0 376 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 PCDH19Q8TAB3 1148 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 SLC13A1Q9BZW2 595 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 LUC7LQ9NQ29 371 aaKnown RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 USP40Q9NVE5 1235 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 NOP53Q9NZM5 478 aaKnown RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 RAI14Q9P0K7 980 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 TMEFF2Q9UIK5 374 aaPredicted RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 MKL2Q9ULH7 1088 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
MARK3-213ENST00000558611 FZD1Q9UP38 647 aa11.65□□□□□ -0.54
MARK3-213ENST00000558611 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 ARNTLO00327 626 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 LDHCP07864 332 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 BMP8BP34820 402 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 BTDP43251 543 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 IREB2P48200 963 aaKnown RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 SEPHS1P49903 392 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 ERVK-21P61565 698 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 SNRPNP63162 240 aaKnown RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 NFIAQ12857 509 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 KIZQ2M2Z5 673 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 TMEM177Q53S58 311 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 CXorf57Q6NSI4 855 aaKnown RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 CCDC103Q8IW40 242 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 CBARPQ8N350 705 aaPredicted RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
MARK3-213ENST00000558611 JPH3Q8WXH2 748 aaPredicted RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 DIO2Q92813 273 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 SPOCK3Q9BQ16 436 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 TCF7L1Q9HCS4 588 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 PIH1D3Q9NQM4 214 aaKnown RBP11.64□□□□□ -0.55
MARK3-213ENST00000558611 COQ6Q9Y2Z9 468 aa11.64□□□□□ -0.55
MARK3-213ENST00000558611 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 MSCO60682 206 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 TCP10Q12799 353 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 PTPN21Q16825 1174 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 INAVAQ3KP66 663 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 EEF1DP3Q658K8 133 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
MARK3-213ENST00000558611 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms