RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
TPM1-209ENST00000558072 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 CBX8Q9HC52 389 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 CTNND2Q9UQB3 1225 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 INO80B-WBP1J3KQ70 363 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 ACKR2O00590 384 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 ERLIN2O94905 339 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 PIGRP01833 764 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 TPM3P06753 285 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 MYBP10242 640 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 GARTP22102 1010 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 LIG4P49917 911 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 CDK7P50613 346 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 NLRP11P59045 1033 aaKnown RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 MRPS6P82932 125 aaKnown RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 SLC39A5Q6ZMH5 540 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 C11orf57Q6ZUT1 292 aaPredicted RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 SLC9A9Q8IVB4 645 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 SMYD4Q8IYR2 804 aaPredicted RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 CSGALNACT2Q8N6G5 542 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 BSNDQ8WZ55 320 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 EVPLQ92817 2033 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 CELF4Q9BZC1 486 aaKnown RBP13.6□□□□□ -0.23
TPM1-209ENST00000558072 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 ATP11BQ9Y2G3 1177 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 FRMD4BQ9Y2L6 1034 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 TRPV2Q9Y5S1 764 aa13.6□□□□□ -0.23
TPM1-209ENST00000558072 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 A0A087WZ62 844 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 HNRNPDLO14979 420 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 CAPN15O75808 1086 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 VTNP04004 478 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 PRKCBP05771 671 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 CDK11BP21127 795 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 EIF4BP23588 611 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 MRE11P49959 708 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 RBL2Q08999 1139 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 IQCB1Q15051 598 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 ANKRD33Q7Z3H0 272 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 FILIP1Q7Z7B0 1213 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 NELFCDQ8IXH7 590 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 HPS3Q969F9 1004 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 ADPGKQ9BRR6 497 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 OSBPL7Q9BZF2 842 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 KCTD10Q9H3F6 313 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 FZD8Q9H461 694 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 METTL14Q9HCE5 456 aaKnown RBP13.59□□□□□ -0.23
TPM1-209ENST00000558072 NFE2L3Q9Y4A8 694 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 UMODL1Q5DID0 1318 aa13.59□□□□□ -0.23
TPM1-209ENST00000558072 GPR182O15218 404 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 MAPK13O15264 365 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 SLC16A3O15427 465 aaKnown RBP13.58□□□□□ -0.24
TPM1-209ENST00000558072 GPR32O75388 356 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 TOM1L1O75674 476 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 CTSHP09668 335 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 DARSP14868 501 aaKnown RBP13.58□□□□□ -0.24
TPM1-209ENST00000558072 EEF1GP26641 437 aaKnown RBP13.58□□□□□ -0.24
TPM1-209ENST00000558072 CASP5P51878 434 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 POU5F1Q01860 360 aaKnown RBP13.58□□□□□ -0.24
TPM1-209ENST00000558072 PPP2R3AQ06190 1150 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 ENPEPQ07075 957 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 ADAM9Q13443 819 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 ZC2HC1CQ53FD0 456 aaPredicted RBP13.58□□□□□ -0.24
TPM1-209ENST00000558072 FAM26DQ5JW98 314 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 ANKRD40Q6AI12 368 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 TTI2Q6NXR4 508 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 ARMCX5Q6P1M9 558 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 KSR1Q8IVT5 923 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 ADAMTS10Q9H324 1103 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 SEMA6BQ9H3T3 888 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 IFT122Q9HBG6 1241 aa13.58□□□□□ -0.24
TPM1-209ENST00000558072 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
TPM1-209ENST00000558072 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 N4BP3O15049 544 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 CLDN3O15551 220 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 EPB41P11171 864 aaKnown RBP13.57□□□□□ -0.24
TPM1-209ENST00000558072 NR2F2P24468 414 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 THPOP40225 353 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 TLE2Q04725 743 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 MBTD1Q05BQ5 628 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 SNX17Q15036 470 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms