RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 KAT2BQ92831 832 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 NUP58Q9BVL2 599 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 TARS2Q9BW92 718 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 LSM14BQ9BX40 385 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 SETD4Q9NVD3 440 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 TRMT1Q9NXH9 659 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 CYBAP13498 195 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 ELNP15502 786 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 SNRNP35Q16560 246 aaKnown RBP22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 KIAA0753Q2KHM9 967 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 MARCH8Q5T0T0 291 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 E4F1Q66K89 784 aaPredicted RBP22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 RETREG2Q8NC44 543 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 CD99L2Q8TCZ2 262 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 ZBTB45Q96K62 511 aaPredicted RBP22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 AP5M1Q9H0R1 490 aa22.27■■□□□ 1.16
SNRPA1-205ENST00000558036 STX10O60499 249 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 F2P00734 622 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 ACTN1P12814 892 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 AKR1A1P14550 325 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 SLC9A1P19634 815 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 PPP2R3AQ06190 1150 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 KIF22Q14807 665 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 CBWD6Q4V339 395 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 CBWD3Q5JTY5 395 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 CBWD5Q5RIA9 395 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 MFSD14CQ5VZR4 134 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 NEK11Q8NG66 645 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 PLEKHO2Q8TD55 490 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 HAPLN2Q9GZV7 340 aa22.27■■□□□ 1.15
SNRPA1-205ENST00000558036 MYADML2A6NDP7 307 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 VTNP04004 478 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 MYL3P08590 195 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 MTHFD1LQ6UB35 978 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 CCDC51Q96ER9 411 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 ANKFY1Q9P2R3 1169 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 PHLPP2Q6ZVD8 1323 aa22.26■■□□□ 1.15
SNRPA1-205ENST00000558036 CSDE1O75534 798 aaKnown RBP22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 NOL4O94818 638 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 KRT13P13646 458 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 CPT1AP50416 773 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 FIGNQ5HY92 759 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 CDCA2Q69YH5 1023 aaPredicted RBP22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 OR8K1Q8NGG5 319 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 DNAJC7Q99615 494 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 TMEM134Q9H6X4 195 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 AKT3Q9Y243 479 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 RBAK-RBAKDNI3L0D1 243 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 ARHGAP6O43182 974 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 C6orf222P0C671 652 aaPredicted RBP22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 VAMP7P51809 220 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 FSCN1Q16658 493 aaKnown RBP22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 TOGARAM2Q6ZUX3 1019 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 INTS8Q75QN2 995 aaKnown RBP22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 LMBR1Q8WVP7 490 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 FAM213AQ9BRX8 229 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 CCDC113Q9H0I3 377 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 MINDY3Q9H8M7 445 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 NLRC4Q9NPP4 1024 aa22.25■■□□□ 1.15
SNRPA1-205ENST00000558036 MSCO60682 206 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 ABCD1P33897 745 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 CLCN1P35523 988 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 MAP2K2P36507 400 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 FMO5P49326 533 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 ZBED6P86452 979 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 CACNB2Q08289 660 aaPredicted RBP22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 EXOC3L4Q17RC7 722 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 RAD9BQ6WBX8 426 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 LINC01465Q8N7H1 131 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 CCDC127Q96BQ5 260 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 CHP1Q99653 195 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 DESI2Q9BSY9 194 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 SPTLC3Q9NUV7 552 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 GCNT4Q9P109 453 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 COL1A2P08123 1366 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 A0A1W2PQJ5 194 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 MAGEB2O15479 319 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 SMIM10L2AP0DMW4 78 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 SMIM10L2BP0DMW5 78 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 PON1P27169 355 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 EFNA5P52803 228 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 C1orf220Q5T0J3 134 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 WDR59Q6PJI9 974 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 ZBTB8OSQ8IWT0 167 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 KCNN1Q92952 543 aa22.24■■□□□ 1.15
SNRPA1-205ENST00000558036 INO80B-WBP1J3KQ70 363 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 PGK1P00558 417 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 HARSP12081 509 aaKnown RBP22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 GARTP22102 1010 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 MATR3P43243 847 aaKnown RBP eCLIP22.23■■□□□ 1.151e-7■■□□□ 11.4
SNRPA1-205ENST00000558036 POLR2FP61218 127 aaKnown RBP22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 PPP3CAQ08209 521 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 MFSD10Q14728 455 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 RRAGAQ7L523 313 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 CCAR2Q8N163 923 aaKnown RBP22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 POP1Q99575 1024 aaKnown RBP22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 INO80BQ9C086 356 aaPredicted RBP22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 Q9Y3F1 56 aa22.23■■□□□ 1.15
SNRPA1-205ENST00000558036 DUSP11O75319 330 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-205ENST00000558036 PIGRP01833 764 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms