RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SYKP43405 635 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 AFMP43652 599 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 SMTNP53814 917 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 NCBP1Q09161 790 aaKnown RBP15.8■□□□□ 0.12
USP3-205ENST00000557884 PRPF4BQ13523 1007 aaKnown RBP15.8■□□□□ 0.12
USP3-205ENST00000557884 LONRF3Q496Y0 759 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 NOTUMQ6P988 496 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 SFR1Q86XK3 245 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 ECHDC2Q86YB7 292 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 CEP57L1Q8IYX8 460 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 DNAJC19Q96DA6 116 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 PYM1Q9BRP8 204 aaKnown RBP15.8■□□□□ 0.12
USP3-205ENST00000557884 KBTBD4Q9NVX7 518 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 LARSQ9P2J5 1176 aaKnown RBP15.8■□□□□ 0.12
USP3-205ENST00000557884 ARHGAP28Q9P2N2 729 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 CNTNAP2Q9UHC6 1331 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 K7ENM7 598 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 K7ERI5 159 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 STAG3L1P0CL83 205 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 ASIC1P78348 528 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 FAM189BP81408 668 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 PCBP1Q15365 356 aaKnown RBP eCLIP15.79■□□□□ 0.12
USP3-205ENST00000557884 FAM187BQ17R55 369 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 PAN2Q504Q3 1202 aaKnown RBP15.79■□□□□ 0.12
USP3-205ENST00000557884 UBXN11Q5T124 520 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 TAS1R3Q7RTX0 852 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 TMEM161BQ8NDZ6 487 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 LPPQ93052 612 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 EIF2AQ9BY44 585 aaKnown RBP15.79■□□□□ 0.12
USP3-205ENST00000557884 BLZF1Q9H2G9 400 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 MAGEF1Q9HAY2 307 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 TBC1D7Q9P0N9 293 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 PCDHB2Q9Y5E7 798 aa15.79■□□□□ 0.12
USP3-205ENST00000557884 PHLPP2Q6ZVD8 1323 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 A0A0U1RQF3 1178 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 FAM237AA0A1B0GTK4 181 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 ACKR2O00590 384 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 TRAK2O60296 914 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 NPTXRO95502 500 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 SLFN14P0C7P3 912 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 MAPTP10636 758 aaKnown RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 FGFR1P11362 822 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 ATF7P17544 494 aaPredicted RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 NMT1P30419 496 aaKnown RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 AXLP30530 894 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 HTRA4P83105 476 aaPredicted RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 AMPD3Q01432 767 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 HERC4Q5GLZ8 1057 aaPredicted RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 NT5DC1Q5TFE4 455 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 FAM43BQ6ZT52 329 aaPredicted RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 FAM178BQ8IXR5 827 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 CRIPAKQ8N1N5 446 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 CCDC51Q96ER9 411 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 PRIMPOLQ96LW4 560 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 FAM161BQ96MY7 647 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 NTPCRQ9BSD7 190 aaKnown RBP15.78■□□□□ 0.12
USP3-205ENST00000557884 TRIM9Q9C026 710 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 LRRC27Q9C0I9 530 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 PDZD7Q9H5P4 517 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 TMEM134Q9H6X4 195 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 PANK4Q9NVE7 773 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 TMEM161AQ9NX61 479 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 INSL6Q9Y581 213 aa15.78■□□□□ 0.12
USP3-205ENST00000557884 CHD7Q9P2D1 2997 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 MEIS3P2A8K0S8 358 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.12
USP3-205ENST00000557884 DGKIO75912 1065 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 GAP43P17677 238 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 NCKAP1LP55160 1127 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 STRN3Q13033 797 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 CUL4BQ13620 913 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 ATF7IP2Q5U623 682 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 EEF1DP3Q658K8 133 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 PPP2R2DQ66LE6 453 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 Q7L0L9 218 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 HAUS6Q7Z4H7 955 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 SPRED2Q7Z698 418 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 ZNF598Q86UK7 904 aaKnown RBP15.77■□□□□ 0.12
USP3-205ENST00000557884 PAGE5Q96GU1 130 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 C7orf25Q9BPX7 421 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 APOL6Q9BWW8 343 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 MRPL4Q9BYD3 311 aaKnown RBP15.77■□□□□ 0.12
USP3-205ENST00000557884 TRIM6Q9C030 488 aaPredicted RBP15.77■□□□□ 0.12
USP3-205ENST00000557884 SLC28A3Q9HAS3 691 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 RNF19AQ9NV58 838 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 USP25Q9UHP3 1055 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 KCNG1Q9UIX4 513 aa15.77■□□□□ 0.12
USP3-205ENST00000557884 MICAL3Q7RTP6 2002 aa15.77■□□□□ 0.11
USP3-205ENST00000557884 A0A1B0GUA9 196 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 FRMD3A2A2Y4 597 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 TBKBP1A7MCY6 615 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 H0YCG3 227 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 N4BP3O15049 544 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 ZNF202O95125 648 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 RAB27AP51159 221 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 TAP1Q03518 808 aa15.76■□□□□ 0.11
USP3-205ENST00000557884 COASYQ13057 564 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms