RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DHX58Q96C10 678 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 DNAJC19Q96DA6 116 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 PGBD4Q96DM1 585 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 PPP1R16BQ96T49 567 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 ADPGKQ9BRR6 497 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 ZBED2Q9BTP6 218 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 GTPBP4Q9BZE4 634 aaKnown RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 OSBPL7Q9BZF2 842 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 TRIM9Q9C026 710 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 CCDC113Q9H0I3 377 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 MINDY3Q9H8M7 445 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 HOOK1Q9UJC3 728 aaKnown RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 PIN4Q9Y237 131 aaKnown RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 PCDHB7Q9Y5E2 793 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 CNTNAP2Q9UHC6 1331 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 ZMYM2Q9UBW7 1377 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 A0A1B0GVL5 298 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 N4BP3O15049 544 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 TSPAN1O60635 241 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 PRPF4BQ13523 1007 aaKnown RBP15.07■□□□□ 0
SHMT2-234ENST00000557703 AMHR2Q16671 573 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 TWF2Q6IBS0 349 aaKnown RBP15.07■□□□□ 0
SHMT2-234ENST00000557703 SLC27A1Q6PCB7 646 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 FAM178BQ8IXR5 827 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 FSIP1Q8NA03 581 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 TMEM161BQ8NDZ6 487 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 BSNDQ8WZ55 320 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 TIGD1Q96MW7 591 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 GBP4Q96PP9 640 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 MRPL4Q9BYD3 311 aaKnown RBP15.07■□□□□ 0
SHMT2-234ENST00000557703 LRFN2Q9ULH4 789 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 PCDHB13Q9Y5F0 798 aa15.07■□□□□ 0
SHMT2-234ENST00000557703 ACTN4O43707 911 aaKnown RBP15.06■□□□□ 0
SHMT2-234ENST00000557703 TLL1O43897 1013 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 ZNF202O95125 648 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 PRKCBP05771 671 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 ARF4P18085 180 aaPredicted RBP15.06■□□□□ 0
SHMT2-234ENST00000557703 NDUFA8P51970 172 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 UBE2HP62256 183 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 GTF2BQ00403 316 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 FAM160A1Q05DH4 1040 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 KYAT1Q16773 422 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 TCTN1Q2MV58 587 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 ZPBP2Q6X784 338 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 ZNF720Q7Z2F6 126 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 HAUS6Q7Z4H7 955 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 MRPL10Q7Z7H8 261 aaKnown RBP15.06■□□□□ 0
SHMT2-234ENST00000557703 ZNF668Q96K58 619 aaPredicted RBP15.06■□□□□ 0
SHMT2-234ENST00000557703 SAMD11Q96NU1 681 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 GDPD2Q9HCC8 539 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 FAM105AQ9NUU6 356 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 PANK4Q9NVE7 773 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 TNFSF13BQ9Y275 285 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 RWDD3Q9Y3V2 267 aa15.06■□□□□ 0
SHMT2-234ENST00000557703 LAMA2P24043 3122 aaKnown RBP15.06■□□□□ 0
SHMT2-234ENST00000557703 GOLGA6L22H0YM25 854 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 MGEA5O60502 916 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 CSDE1O75534 798 aaKnown RBP15.05■□□□□ -0
SHMT2-234ENST00000557703 DGKIO75912 1065 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 DEFB103AP81534 67 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 RAD51AP2Q09MP3 1159 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 PSMD2Q13200 908 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 DCAF4L1Q3SXM0 396 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 HERC4Q5GLZ8 1057 aaPredicted RBP15.05■□□□□ -0
SHMT2-234ENST00000557703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.05■□□□□ -04e-7■□□□□ 9.3
SHMT2-234ENST00000557703 UNC13DQ70J99 1090 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 DYMQ7RTS9 669 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 ECHDC2Q86YB7 292 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
SHMT2-234ENST00000557703 LINC01599Q8WXQ3 324 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 CCDC47Q96A33 483 aaKnown RBP15.05■□□□□ -0
SHMT2-234ENST00000557703 ZNF689Q96CS4 500 aaPredicted RBP15.05■□□□□ -0
SHMT2-234ENST00000557703 KANSL3Q9P2N6 904 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 EXOC7Q9UPT5 735 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 COL4A6Q14031 1691 aa15.05■□□□□ -0
SHMT2-234ENST00000557703 ADGRA3Q8IWK6 1321 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 SFI1A8K8P3 1242 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 SLC16A4O15374 487 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 PIGRP01833 764 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 IDEP14735 1019 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 POU5F1Q01860 360 aaKnown RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 HSP90AA2PQ14568 343 aaPredicted RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 LONRF3Q496Y0 759 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 KRBA2Q6ZNG9 492 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 ZNF598Q86UK7 904 aaKnown RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 CMTR2Q8IYT2 770 aaKnown RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 FMR1NBQ8N0W7 255 aaPredicted RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 ENGASEQ8NFI3 743 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 PAGE5Q96GU1 130 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 YME1L1Q96TA2 773 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 MRPL9Q9BYD2 267 aaKnown RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 PBX4Q9BYU1 374 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 TRIM6Q9C030 488 aaPredicted RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 MRPL44Q9H9J2 332 aaKnown RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 SLC28A3Q9HAS3 691 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 SERTAD1Q9UHV2 236 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 TBX20Q9UMR3 447 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 PCDHB2Q9Y5E7 798 aa15.04■□□□□ -0
SHMT2-234ENST00000557703 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.04■□□□□ -0
SHMT2-234ENST00000557703 NPHP3-ACAD11A0A0J9YXS1 232 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms