RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ALG6Q9Y672 507 aa17.57■□□□□ 0.4
SHMT2-232ENST00000557487 IGSF9BQ9UPX0 1349 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 FAM86B1E9PN63 330 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 SHBGP04278 402 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 FAM86B2P0C5J1 330 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 KRT13P13646 458 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 ABCB4P21439 1286 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 KCNA3P22001 575 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 ATP5DP30049 168 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 PDE6CP51160 858 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 GTF2IP78347 998 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 CETN1Q12798 172 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 SPRED3Q2MJR0 410 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 C1orf186Q6ZWK4 172 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 TRMT10CQ7L0Y3 403 aaKnown RBP17.56■□□□□ 0.4
SHMT2-232ENST00000557487 MDM1Q8TC05 714 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 FBXO25Q8TCJ0 367 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 TMEM174Q8WUU8 243 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 HSD17B14Q9BPX1 270 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 ZSWIM1Q9BR11 485 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 THAP2Q9H0W7 228 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 HOMER3Q9NSC5 361 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 DONSONQ9NYP3 566 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 SNX24Q9Y343 169 aa17.56■□□□□ 0.4
SHMT2-232ENST00000557487 RPTORQ8N122 1335 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 PIK3CDO00329 1044 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 PDE6BP35913 854 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 GPC5P78333 572 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 ELF3P78545 371 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-232ENST00000557487 CTTNQ14247 550 aaKnown RBP17.55■□□□□ 0.4
SHMT2-232ENST00000557487 SLC29A2Q14542 456 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 CCDC63Q8NA47 563 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 GMCL1P1Q8NEA9 526 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 ALG3Q92685 438 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 GLG1Q92896 1179 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 ARHGEF26Q96DR7 871 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 AZI2Q9H6S1 392 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 VEZTQ9HBM0 779 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 ERVK-5Q9HDB9 667 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 ZNF720Q7Z2F6 126 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 TRPM8Q7Z2W7 1104 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 PRELID2Q8N945 189 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 GMCL1Q96IK5 515 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 AGPAT3Q9NRZ7 376 aa17.55■□□□□ 0.4
SHMT2-232ENST00000557487 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHMT2-232ENST00000557487 PASKQ96RG2 1323 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 A0A1B0GUA9 196 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-232ENST00000557487 RASGRF2O14827 1237 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 ATP6V1G2O95670 118 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 ZNF76P36508 570 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 PPP2R5CQ13362 524 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 ALCAMQ13740 583 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 C12orf50Q8NA57 414 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-232ENST00000557487 SLCO2A1Q92959 643 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 ART4Q93070 314 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 CTTNBP2NLQ9P2B4 639 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 COG5Q9UP83 839 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 PCDHA3Q9Y5H8 950 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 LRRC37AA6NMS7 1700 aa17.54■□□□□ 0.4
SHMT2-232ENST00000557487 C6orf229H3BNL8 230 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 RIPK2O43353 540 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 RTN2O75298 545 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 GZMAP12544 262 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 RPL21P46778 160 aaKnown RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CYP4A11Q02928 519 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 KCNA1Q09470 495 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 BFSP1Q12934 665 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CEP57Q86XR8 500 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 FAM178BQ8IXR5 827 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 LRRC34Q8IZ02 419 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 SCLT1Q96NL6 688 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 USP20Q9Y2K6 914 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 LTBP1Q14766 1721 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 TLDC2A0PJX2 215 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 PMM2O15305 246 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 NMT1P30419 496 aaKnown RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 ZNF211Q13398 564 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 PPP1R7Q15435 360 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 GPR162Q16538 588 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CBWD6Q4V339 395 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CBWD3Q5JTY5 395 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CBWD5Q5RIA9 395 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CDC42EP5Q6NZY7 148 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 CCDC137Q6PK04 289 aaKnown RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 INTS8Q75QN2 995 aaKnown RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 C18orf8Q96DM3 657 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 SERPINB12Q96P63 405 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 UIMC1Q96RL1 719 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 PLVAPQ9BX97 442 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 SEPT11Q9NVA2 429 aaKnown RBP17.53■□□□□ 0.4
SHMT2-232ENST00000557487 PIM2Q9P1W9 311 aa17.53■□□□□ 0.4
SHMT2-232ENST00000557487 BACH1O14867 736 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 YBX3P16989 372 aaKnown RBP eCLIP17.52■□□□□ 0.47e-8■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms