RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ZBP1Q9H171 429 aa14.02□□□□□ -0.17
SHMT2-230ENST00000557427 GDPD2Q9HCC8 539 aa14.02□□□□□ -0.17
SHMT2-230ENST00000557427 NCDNQ9UBB6 729 aa14.02□□□□□ -0.17
SHMT2-230ENST00000557427 CDV3Q9UKY7 258 aaKnown RBP14.02□□□□□ -0.17
SHMT2-230ENST00000557427 IRAK3Q9Y616 596 aa14.02□□□□□ -0.17
SHMT2-230ENST00000557427 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-230ENST00000557427 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
SHMT2-230ENST00000557427 MEIS1O00470 390 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 KLRC1P26715 233 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 SREBF1P36956 1147 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
SHMT2-230ENST00000557427 FAM43BQ6ZT52 329 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-230ENST00000557427 CABP7Q86V35 215 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 PLA2G4DQ86XP0 818 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 VPS52Q8N1B4 723 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 SDF4Q9BRK5 362 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 FOXQ1Q9C009 403 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-230ENST00000557427 AGO4Q9HCK5 861 aaKnown RBP14.01□□□□□ -0.17
SHMT2-230ENST00000557427 PARD6AQ9NPB6 346 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 SLC9A2Q9UBY0 812 aa14.01□□□□□ -0.17
SHMT2-230ENST00000557427 ESYT2A0FGR8 921 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 PRR5-ARHGAP8B1AHC4 643 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 FAM86B1E9PN63 330 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 GPR182O15218 404 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 FAM86B2P0C5J1 330 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 SRFP11831 508 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 ARHGAP8P85298 464 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 ATL3Q6DD88 541 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 LRSAM1Q6UWE0 723 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 FERMT3Q86UX7 667 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 TEX2Q8IWB9 1127 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 GPR161Q8N6U8 529 aaKnown RBP14□□□□□ -0.17
SHMT2-230ENST00000557427 CCDC148Q8NFR7 591 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 BICD2Q8TD16 824 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 BCL7CQ8WUZ0 217 aaPredicted RBP14□□□□□ -0.17
SHMT2-230ENST00000557427 AIFM3Q96NN9 605 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 PPP1R16BQ96T49 567 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 SFXN1Q9H9B4 322 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 JPH1Q9HDC5 661 aaPredicted RBP14□□□□□ -0.17
SHMT2-230ENST00000557427 COL4A3Q01955 1670 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 FAM208BQ5VWN6 2430 aa14□□□□□ -0.17
SHMT2-230ENST00000557427 DEXIO95424 95 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 CYP3A4P08684 503 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 CTSAP10619 480 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 FDPSP14324 419 aaKnown RBP13.99□□□□□ -0.17
SHMT2-230ENST00000557427 RFX1P22670 979 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 BCAR1P56945 870 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 LMNB2Q03252 620 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 ITGB3BPQ13352 177 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-230ENST00000557427 KIZQ2M2Z5 673 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 PJA1Q8NG27 643 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 OSMRQ99650 979 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 SH3GLB2Q9NR46 395 aa13.99□□□□□ -0.17
SHMT2-230ENST00000557427 GPR32O75388 356 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 CDKL5O76039 1030 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-230ENST00000557427 ACTR2P61160 394 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 ZNF528Q3MIS6 628 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 PRR16Q569H4 304 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 PPM1JQ5JR12 505 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 CCDC183Q5T5S1 534 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 PLPPR4Q7Z2D5 763 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 ECHDC2Q86YB7 292 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 ST13P5Q8NFI4 369 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-230ENST00000557427 MYADMQ96S97 322 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 VN1R3Q9BXE9 311 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 AZI2Q9H6S1 392 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 ARHGEF3Q9NR81 526 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 KCNJ14Q9UNX9 436 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 ASPMQ8IZT6 3477 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 PKD1L2Q7Z442 2459 aa13.98□□□□□ -0.17
SHMT2-230ENST00000557427 NFASCO94856 1347 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 ZBTB42B2RXF5 422 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 SPTLC1O15269 473 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 HOXA2O43364 376 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 STAT5BP51692 787 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 CLCN4P51793 760 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-230ENST00000557427 ODR4Q5SWX8 454 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 C15orf39Q6ZRI6 1047 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 NIPA1Q7RTP0 329 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 ZNF598Q86UK7 904 aaKnown RBP13.97□□□□□ -0.17
SHMT2-230ENST00000557427 ABI1Q8IZP0 508 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 ZBTB44Q8NCP5 570 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 HELQQ8TDG4 1101 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 CRYGNQ8WXF5 182 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 ZNF577Q9BSK1 485 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 EPC1Q9H2F5 836 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 CFAP45Q9UL16 551 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 SMG5Q9UPR3 1016 aaKnown RBP13.97□□□□□ -0.17
SHMT2-230ENST00000557427 DOCK8Q8NF50 2099 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 EVPLQ92817 2033 aa13.97□□□□□ -0.17
SHMT2-230ENST00000557427 STK36Q9NRP7 1315 aa13.96□□□□□ -0.17
SHMT2-230ENST00000557427 FASNP49327 2511 aaKnown RBP13.96□□□□□ -0.17
SHMT2-230ENST00000557427 IGLV3-22A0A075B6J6 115 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms