RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
VPS33B-206ENST00000557358 INPP5FQ9Y2H2 1132 aa15.26■□□□□ 0.03
VPS33B-206ENST00000557358 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 RBAK-RBAKDNI3L0D1 243 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 N4BP3O15049 544 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 TSPAN1O60635 241 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 SMTNP53814 917 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 RESTQ13127 1097 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 PRPF4BQ13523 1007 aaKnown RBP15.25■□□□□ 0.03
VPS33B-206ENST00000557358 ECM1Q16610 540 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 NOMO2Q5JPE7 1267 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 CDCA2Q69YH5 1023 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-206ENST00000557358 PDE12Q6L8Q7 609 aaKnown RBP15.25■□□□□ 0.03
VPS33B-206ENST00000557358 SLC27A1Q6PCB7 646 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 COLGALT1Q8NBJ5 622 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 RSAD1Q9HA92 442 aa15.25■□□□□ 0.03
VPS33B-206ENST00000557358 H0YCG3 227 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 K7ERI5 159 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 NR1I2O75469 434 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 FGF18O76093 207 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 PRKCBP05771 671 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 KRT18P05783 430 aaKnown RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 PLA2G4BP0C869 781 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 ARF4P18085 180 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 HOXA11P31270 313 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 CEBPZQ03701 1054 aaKnown RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 STK38Q15208 465 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 FAM187BQ17R55 369 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 CLLU1OSQ5K130 101 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 RINT1Q6NUQ1 792 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 KCNT2Q6UVM3 1135 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 SYT2Q8N9I0 419 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 TMEM87AQ8NBN3 555 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 TMEM169Q96HH4 297 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 CPB2Q96IY4 423 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 PLIN2Q99541 437 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 MMTAG2Q9BU76 263 aaKnown RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 ALG13Q9NP73 1137 aaKnown RBP15.24■□□□□ 0.03
VPS33B-206ENST00000557358 KMT5AQ9NQR1 393 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 SPG21Q9NZD8 308 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 STK39Q9UEW8 545 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 CLIC4Q9Y696 253 aa15.24■□□□□ 0.03
VPS33B-206ENST00000557358 MYO7AQ13402 2215 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 GRM6O15303 877 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 HIP1RO75146 1068 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 ITGB1P05556 798 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
VPS33B-206ENST00000557358 GUCY2CP25092 1073 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 MARCKSP29966 332 aaPredicted RBP15.23■□□□□ 0.03
VPS33B-206ENST00000557358 PEX3P56589 373 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 STRN3Q13033 797 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 LONRF3Q496Y0 759 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 MRPL10Q7Z7H8 261 aaKnown RBP15.23■□□□□ 0.03
VPS33B-206ENST00000557358 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
VPS33B-206ENST00000557358 SPPL3Q8TCT6 385 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 LPPQ93052 612 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 RPS6KC1Q96S38 1066 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 CWH43Q9H720 699 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 TLR9Q9NR96 1032 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 LARSQ9P2J5 1176 aaKnown RBP15.23■□□□□ 0.03
VPS33B-206ENST00000557358 LZTS1Q9Y250 596 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 SRPRBQ9Y5M8 271 aaKnown RBP15.23■□□□□ 0.03
VPS33B-206ENST00000557358 MYH11P35749 1972 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 TRANK1O15050 2925 aa15.23■□□□□ 0.03
VPS33B-206ENST00000557358 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 ACKR2O00590 384 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 ZC3H11AO75152 810 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS33B-206ENST00000557358 OFD1O75665 1012 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 CSPG5O95196 566 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 NPTXRO95502 500 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 LINC00271P0C7V0 271 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 SCP2P22307 547 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 PLCB3Q01970 1234 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 DCAF4L1Q3SXM0 396 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 TMEM119Q4V9L6 283 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 C1orf186Q6ZWK4 172 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 MRPS27Q92552 414 aaKnown RBP15.22■□□□□ 0.03
VPS33B-206ENST00000557358 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 APOL6Q9BWW8 343 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 CCSER1Q9C0I3 900 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 FZD8Q9H461 694 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 ENTPD7Q9NQZ7 604 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 RNF19AQ9NV58 838 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 PARP2Q9UGN5 583 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 FAM50BQ9Y247 325 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 GIT1Q9Y2X7 761 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 IPPQ9Y573 584 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
VPS33B-206ENST00000557358 TBCAO75347 108 aaKnown RBP15.21■□□□□ 0.03
VPS33B-206ENST00000557358 ALDH2P05091 517 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 SRGAP2BP0DMP2 458 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
VPS33B-206ENST00000557358 ABCD1P33897 745 aa15.21■□□□□ 0.03
VPS33B-206ENST00000557358 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms