RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MTSS1LQ765P7 747 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 GRASPQ7Z6J2 395 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-220ENST00000557037 LRRC71Q8N4P6 559 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 FAM160A2Q8N612 972 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-220ENST00000557037 MAP7D2Q96T17 732 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 PHF20Q9BVI0 1012 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 ADAM33Q9BZ11 813 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 CHRDQ9H2X0 955 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 ZNF302Q9NR11 478 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 HEBP1Q9NRV9 189 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 FAN1Q9Y2M0 1017 aa14.22□□□□□ -0.13
PSEN1-220ENST00000557037 MRPS17Q9Y2R5 130 aaKnown RBP14.22□□□□□ -0.13
PSEN1-220ENST00000557037 NFASCO94856 1347 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 BPTFQ12830 3046 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 UNC79Q9P2D8 2635 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 IGKV6D-21A0A0A0MT36 114 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 SHISA7A6NL88 538 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 GIPC1O14908 333 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 AXIN1O15169 862 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 ATG7O95352 703 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 DARSP14868 501 aaKnown RBP14.21□□□□□ -0.13
PSEN1-220ENST00000557037 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
PSEN1-220ENST00000557037 NT5C2P49902 561 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 SATB1Q01826 763 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 PPP2R5DQ14738 602 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 SOWAHCQ53LP3 525 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-220ENST00000557037 HEATR6Q6AI08 1181 aaKnown RBP14.21□□□□□ -0.13
PSEN1-220ENST00000557037 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 ABHD15Q6UXT9 468 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 CEP68Q76N32 757 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 CYB5R4Q7L1T6 521 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 FGF13Q92913 245 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 HERC2P3Q9BVR0 1158 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 LSM14BQ9BX40 385 aaKnown RBP14.21□□□□□ -0.13
PSEN1-220ENST00000557037 KRT23Q9C075 422 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 PSTPIP2Q9H939 334 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 ZDHHC7Q9NXF8 308 aa14.21□□□□□ -0.13
PSEN1-220ENST00000557037 PRG3Q9Y2Y8 225 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-220ENST00000557037 MTCL1Q9Y4B5 1905 aaKnown RBP14.2□□□□□ -0.14
PSEN1-220ENST00000557037 TGM5O43548 720 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 ALDH2P05091 517 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 GLUD2P49448 558 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 NOVA1P51513 510 aaKnown RBP14.2□□□□□ -0.14
PSEN1-220ENST00000557037 AFF1P51825 1210 aaKnown RBP14.2□□□□□ -0.14
PSEN1-220ENST00000557037 TWF2Q6IBS0 349 aaKnown RBP14.2□□□□□ -0.14
PSEN1-220ENST00000557037 EFCAB12Q6NXP0 572 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 ITFG1Q8TB96 612 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 HDAC7Q8WUI4 952 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 GATA6Q92908 595 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 B3GALT6Q96L58 329 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 MXRA8Q9BRK3 442 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 ARRDC1-AS1Q9H2J1 176 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 PLEKHA4Q9H4M7 779 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 RXFP1Q9HBX9 757 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 AGO4Q9HCK5 861 aaKnown RBP14.2□□□□□ -0.14
PSEN1-220ENST00000557037 STK39Q9UEW8 545 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
PSEN1-220ENST00000557037 GREB1Q4ZG55 1949 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 SPDYE3A6NKU9 549 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 NRP1O14786 923 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 PAPLNO95428 1278 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 KIF5BP33176 963 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 GPC3P51654 580 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 CCR3P51677 355 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 ZNF252P-AS1Q0IIN9 211 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 URGCPQ8TCY9 931 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 NLRP7Q8WX94 980 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 FAM193BQ96PV7 902 aaPredicted RBP14.19□□□□□ -0.14
PSEN1-220ENST00000557037 PLA2G2FQ9BZM2 168 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 SMOC1Q9H4F8 434 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 LMAN1LQ9HAT1 526 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 MARCH5Q9NX47 278 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 WASF3Q9UPY6 502 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 SSX2IPQ9Y2D8 614 aa14.19□□□□□ -0.14
PSEN1-220ENST00000557037 ZMYND10O75800 440 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 RPL17P18621 184 aaKnown RBP14.18□□□□□ -0.14
PSEN1-220ENST00000557037 CXCL12P48061 93 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 ZNF687Q8N1G0 1237 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 LINC01465Q8N7H1 131 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 RSPH1Q8WYR4 309 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
PSEN1-220ENST00000557037 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 SPAG17Q6Q759 2223 aa14.18□□□□□ -0.14
PSEN1-220ENST00000557037 MYH9P35579 1960 aaKnown RBP14.17□□□□□ -0.14
PSEN1-220ENST00000557037 F8W810 466 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 MAGEB2O15479 319 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 POMCP01189 267 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 ZNF806P0C7X5 589 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 TMOD1P28289 359 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 MIS18BP1Q6P0N0 1132 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 LILRA6Q6PI73 481 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 C19orf48Q6RUI8 117 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 ING5Q8WYH8 240 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 TMEM175Q9BSA9 504 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 SCNM1Q9BWG6 230 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 FAM105AQ9NUU6 356 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms